Protein–RNA interactions for Protein: O95503

CBX6, Chromobox protein homolog 6, humanhuman

Predictions only

Length 412 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX6O95503 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC20.43■□□□□ 0.86
CBX6O95503 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC20.43■□□□□ 0.86
CBX6O95503 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC20.43■□□□□ 0.86
CBX6O95503 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC20.43■□□□□ 0.86
CBX6O95503 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC20.43■□□□□ 0.86
CBX6O95503 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC20.42■□□□□ 0.86
CBX6O95503 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
CBX6O95503 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CBX6O95503 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
CBX6O95503 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
CBX6O95503 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC20.42■□□□□ 0.86
CBX6O95503 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC20.42■□□□□ 0.86
CBX6O95503 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CBX6O95503 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CBX6O95503 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
CBX6O95503 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
CBX6O95503 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
CBX6O95503 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC20.42■□□□□ 0.86
CBX6O95503 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC20.42■□□□□ 0.86
CBX6O95503 AL499627.2-201ENST00000606283 725 ntBASIC20.42■□□□□ 0.86
CBX6O95503 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC20.42■□□□□ 0.86
CBX6O95503 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC20.42■□□□□ 0.86
CBX6O95503 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CBX6O95503 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CBX6O95503 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
CBX6O95503 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
CBX6O95503 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CBX6O95503 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC20.41■□□□□ 0.86
CBX6O95503 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC20.41■□□□□ 0.86
CBX6O95503 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
CBX6O95503 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
CBX6O95503 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC20.41■□□□□ 0.86
CBX6O95503 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC20.41■□□□□ 0.86
CBX6O95503 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC20.41■□□□□ 0.86
CBX6O95503 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CBX6O95503 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC20.41■□□□□ 0.86
CBX6O95503 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC20.41■□□□□ 0.86
CBX6O95503 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC20.41■□□□□ 0.86
CBX6O95503 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CBX6O95503 VGF-203ENST00000611537 1622 ntTSL 5 BASIC20.41■□□□□ 0.86
CBX6O95503 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC20.41■□□□□ 0.86
CBX6O95503 AC003102.1-202ENST00000563394 1796 ntBASIC20.41■□□□□ 0.86
CBX6O95503 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CBX6O95503 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC20.41■□□□□ 0.86
CBX6O95503 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
CBX6O95503 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC20.41■□□□□ 0.86
CBX6O95503 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CBX6O95503 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CBX6O95503 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CBX6O95503 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CBX6O95503 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
CBX6O95503 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CBX6O95503 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CBX6O95503 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC20.4■□□□□ 0.86
CBX6O95503 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CBX6O95503 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
CBX6O95503 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CBX6O95503 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC20.4■□□□□ 0.86
CBX6O95503 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC20.4■□□□□ 0.86
CBX6O95503 TSPY26P-201ENST00000476365 1326 ntBASIC20.4■□□□□ 0.86
CBX6O95503 SMG8-203ENST00000578922 2178 ntBASIC20.4■□□□□ 0.86
CBX6O95503 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC20.4■□□□□ 0.86
CBX6O95503 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CBX6O95503 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
CBX6O95503 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
CBX6O95503 DET1-207ENST00000564406 2315 ntTSL 2 BASIC20.39■□□□□ 0.86
CBX6O95503 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
CBX6O95503 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC20.39■□□□□ 0.86
CBX6O95503 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
CBX6O95503 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
CBX6O95503 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
CBX6O95503 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC20.39■□□□□ 0.85
CBX6O95503 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
CBX6O95503 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CBX6O95503 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CBX6O95503 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC20.39■□□□□ 0.85
CBX6O95503 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC20.39■□□□□ 0.85
CBX6O95503 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC20.39■□□□□ 0.85
CBX6O95503 AC004911.1-201ENST00000416316 871 ntBASIC20.39■□□□□ 0.85
CBX6O95503 AC123595.1-201ENST00000440769 1046 ntBASIC20.39■□□□□ 0.85
CBX6O95503 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC20.39■□□□□ 0.85
CBX6O95503 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC20.39■□□□□ 0.85
CBX6O95503 AL358852.1-201ENST00000623174 1268 ntBASIC20.39■□□□□ 0.85
CBX6O95503 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC20.39■□□□□ 0.85
CBX6O95503 AL512408.1-201ENST00000569378 2000 ntBASIC20.39■□□□□ 0.85
CBX6O95503 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CBX6O95503 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CBX6O95503 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.85
CBX6O95503 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC20.38■□□□□ 0.85
CBX6O95503 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
CBX6O95503 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC20.38■□□□□ 0.85
CBX6O95503 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC20.38■□□□□ 0.85
CBX6O95503 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC20.38■□□□□ 0.85
CBX6O95503 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
CBX6O95503 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
CBX6O95503 ID1-201ENST00000376105 1233 ntBASIC20.38■□□□□ 0.85
CBX6O95503 AC027612.3-201ENST00000413684 1047 ntBASIC20.38■□□□□ 0.85
CBX6O95503 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC20.38■□□□□ 0.85
CBX6O95503 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CBX6O95503 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC20.38■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms