Protein–RNA interactions for Protein: O95219

SNX4, Sorting nexin-4, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4O95219 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SNX4O95219 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
SNX4O95219 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC19.25■□□□□ 0.67
SNX4O95219 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC19.25■□□□□ 0.67
SNX4O95219 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SNX4O95219 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SNX4O95219 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SNX4O95219 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC19.24■□□□□ 0.67
SNX4O95219 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
SNX4O95219 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
SNX4O95219 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
SNX4O95219 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SNX4O95219 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
SNX4O95219 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
SNX4O95219 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC19.24■□□□□ 0.67
SNX4O95219 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SNX4O95219 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC19.24■□□□□ 0.67
SNX4O95219 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
SNX4O95219 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
SNX4O95219 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
SNX4O95219 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC19.24■□□□□ 0.67
SNX4O95219 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
SNX4O95219 GOLGA2P6-201ENST00000340929 2049 ntBASIC19.24■□□□□ 0.67
SNX4O95219 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC19.24■□□□□ 0.67
SNX4O95219 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SNX4O95219 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC19.23■□□□□ 0.67
SNX4O95219 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC19.23■□□□□ 0.67
SNX4O95219 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
SNX4O95219 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SNX4O95219 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC19.23■□□□□ 0.67
SNX4O95219 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SNX4O95219 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SNX4O95219 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
SNX4O95219 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC19.23■□□□□ 0.67
SNX4O95219 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC19.23■□□□□ 0.67
SNX4O95219 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC19.23■□□□□ 0.67
SNX4O95219 KRT16P2-201ENST00000414673 1423 ntBASIC19.23■□□□□ 0.67
SNX4O95219 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC19.23■□□□□ 0.67
SNX4O95219 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SNX4O95219 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC19.23■□□□□ 0.67
SNX4O95219 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC19.23■□□□□ 0.67
SNX4O95219 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
SNX4O95219 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC19.22■□□□□ 0.67
SNX4O95219 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SNX4O95219 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SNX4O95219 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SNX4O95219 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
SNX4O95219 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SNX4O95219 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SNX4O95219 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
SNX4O95219 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SNX4O95219 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SNX4O95219 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC19.22■□□□□ 0.67
SNX4O95219 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC19.22■□□□□ 0.67
SNX4O95219 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC19.22■□□□□ 0.67
SNX4O95219 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC19.22■□□□□ 0.67
SNX4O95219 MFSD11-216ENST00000590393 1141 ntBASIC19.22■□□□□ 0.67
SNX4O95219 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
SNX4O95219 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SNX4O95219 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SNX4O95219 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SNX4O95219 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SNX4O95219 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC19.22■□□□□ 0.67
SNX4O95219 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
SNX4O95219 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC19.22■□□□□ 0.67
SNX4O95219 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SNX4O95219 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
SNX4O95219 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
SNX4O95219 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC19.22■□□□□ 0.67
SNX4O95219 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SNX4O95219 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SNX4O95219 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SNX4O95219 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SNX4O95219 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
SNX4O95219 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SNX4O95219 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SNX4O95219 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SNX4O95219 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SNX4O95219 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC19.21■□□□□ 0.67
SNX4O95219 AC090192.1-201ENST00000517740 490 ntBASIC19.21■□□□□ 0.67
SNX4O95219 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
SNX4O95219 BRI3-207ENST00000539286 699 ntTSL 2 BASIC19.21■□□□□ 0.67
SNX4O95219 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SNX4O95219 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
SNX4O95219 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SNX4O95219 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
SNX4O95219 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
SNX4O95219 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SNX4O95219 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
SNX4O95219 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SNX4O95219 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.66
SNX4O95219 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC19.2■□□□□ 0.66
SNX4O95219 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SNX4O95219 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SNX4O95219 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
SNX4O95219 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC19.2■□□□□ 0.66
SNX4O95219 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
SNX4O95219 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC19.2■□□□□ 0.66
SNX4O95219 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC19.2■□□□□ 0.66
SNX4O95219 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC19.2■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms