Protein–RNA interactions for Protein: O75643

SNRNP200, U5 small nuclear ribonucleoprotein 200 kDa helicase, humanhuman

Known RBP Predictions only

Length 2,136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200O75643 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC19.75■□□□□ 0.75
SNRNP200O75643 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
SNRNP200O75643 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
SNRNP200O75643 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SNRNP200O75643 AL049796.1-201ENST00000565336 1766 ntBASIC19.74■□□□□ 0.75
SNRNP200O75643 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SNRNP200O75643 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC19.74■□□□□ 0.75
SNRNP200O75643 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SNRNP200O75643 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC19.74■□□□□ 0.75
SNRNP200O75643 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
SNRNP200O75643 PPP1R14BP2-201ENST00000426284 444 ntBASIC19.74■□□□□ 0.75
SNRNP200O75643 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SNRNP200O75643 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
SNRNP200O75643 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SNRNP200O75643 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SNRNP200O75643 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
SNRNP200O75643 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
SNRNP200O75643 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SNRNP200O75643 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SNRNP200O75643 AC006128.1-201ENST00000624704 1661 ntBASIC19.73■□□□□ 0.75
SNRNP200O75643 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
SNRNP200O75643 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC19.73■□□□□ 0.75
SNRNP200O75643 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SNRNP200O75643 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SNRNP200O75643 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SNRNP200O75643 AC091874.3-201ENST00000512672 1195 ntBASIC19.73■□□□□ 0.75
SNRNP200O75643 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
SNRNP200O75643 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC19.73■□□□□ 0.75
SNRNP200O75643 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC19.73■□□□□ 0.75
SNRNP200O75643 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SNRNP200O75643 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
SNRNP200O75643 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
SNRNP200O75643 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
SNRNP200O75643 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SNRNP200O75643 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
SNRNP200O75643 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SNRNP200O75643 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC19.73■□□□□ 0.75
SNRNP200O75643 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC19.73■□□□□ 0.75
SNRNP200O75643 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC19.73■□□□□ 0.75
SNRNP200O75643 AC105020.6-201ENST00000621523 1217 ntBASIC19.73■□□□□ 0.75
SNRNP200O75643 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
SNRNP200O75643 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC19.73■□□□□ 0.75
SNRNP200O75643 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
SNRNP200O75643 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SNRNP200O75643 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
SNRNP200O75643 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
SNRNP200O75643 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC19.72■□□□□ 0.75
SNRNP200O75643 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
SNRNP200O75643 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC19.72■□□□□ 0.75
SNRNP200O75643 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
SNRNP200O75643 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SNRNP200O75643 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
SNRNP200O75643 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC19.72■□□□□ 0.75
SNRNP200O75643 AC100791.3-201ENST00000617619 330 ntBASIC19.72■□□□□ 0.75
SNRNP200O75643 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC19.72■□□□□ 0.75
SNRNP200O75643 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC19.72■□□□□ 0.75
SNRNP200O75643 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
SNRNP200O75643 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC19.72■□□□□ 0.75
SNRNP200O75643 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SNRNP200O75643 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SNRNP200O75643 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SNRNP200O75643 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SNRNP200O75643 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SNRNP200O75643 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
SNRNP200O75643 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
SNRNP200O75643 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
SNRNP200O75643 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
SNRNP200O75643 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SNRNP200O75643 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SNRNP200O75643 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC19.71■□□□□ 0.75
SNRNP200O75643 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC19.71■□□□□ 0.75
SNRNP200O75643 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
SNRNP200O75643 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC19.71■□□□□ 0.75
SNRNP200O75643 MIR4651-201ENST00000582622 73 ntBASIC19.71■□□□□ 0.75
SNRNP200O75643 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC19.71■□□□□ 0.75
SNRNP200O75643 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SNRNP200O75643 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SNRNP200O75643 GCK-205ENST00000437084 1385 ntTSL 5 BASIC19.71■□□□□ 0.75
SNRNP200O75643 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
SNRNP200O75643 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC19.7■□□□□ 0.74
SNRNP200O75643 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SNRNP200O75643 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
SNRNP200O75643 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC19.7■□□□□ 0.74
SNRNP200O75643 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC19.7■□□□□ 0.74
SNRNP200O75643 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC19.7■□□□□ 0.74
SNRNP200O75643 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC19.7■□□□□ 0.74
SNRNP200O75643 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SNRNP200O75643 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC19.7■□□□□ 0.74
SNRNP200O75643 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SNRNP200O75643 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SNRNP200O75643 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
SNRNP200O75643 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SNRNP200O75643 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SNRNP200O75643 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC19.7■□□□□ 0.74
SNRNP200O75643 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC19.7■□□□□ 0.74
SNRNP200O75643 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SNRNP200O75643 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
SNRNP200O75643 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
SNRNP200O75643 PLK5-205ENST00000642079 1969 ntBASIC19.69■□□□□ 0.74
SNRNP200O75643 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC19.69■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 16.8 ms