Protein–RNA interactions for Protein: O75427

LRCH4, Leucine-rich repeat and calponin homology domain-containing protein 4, humanhuman

Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH4O75427 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
LRCH4O75427 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC21.45■■□□□ 1.02
LRCH4O75427 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
LRCH4O75427 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
LRCH4O75427 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
LRCH4O75427 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC21.45■■□□□ 1.02
LRCH4O75427 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
LRCH4O75427 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
LRCH4O75427 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC21.45■■□□□ 1.02
LRCH4O75427 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
LRCH4O75427 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
LRCH4O75427 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
LRCH4O75427 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
LRCH4O75427 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC21.44■■□□□ 1.02
LRCH4O75427 HSCB-202ENST00000398941 955 ntTSL 2 BASIC21.44■■□□□ 1.02
LRCH4O75427 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC21.44■■□□□ 1.02
LRCH4O75427 AC137761.2-201ENST00000561729 223 ntBASIC21.44■■□□□ 1.02
LRCH4O75427 AC145350.3-201ENST00000569033 163 ntBASIC21.44■■□□□ 1.02
LRCH4O75427 ANKRD20A6P-201ENST00000618763 204 ntBASIC21.44■■□□□ 1.02
LRCH4O75427 AC010536.3-201ENST00000620306 533 ntBASIC21.44■■□□□ 1.02
LRCH4O75427 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC21.44■■□□□ 1.02
LRCH4O75427 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC21.44■■□□□ 1.02
LRCH4O75427 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
LRCH4O75427 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
LRCH4O75427 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
LRCH4O75427 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC21.44■■□□□ 1.02
LRCH4O75427 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
LRCH4O75427 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
LRCH4O75427 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC21.43■■□□□ 1.02
LRCH4O75427 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC21.43■■□□□ 1.02
LRCH4O75427 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC21.43■■□□□ 1.02
LRCH4O75427 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC21.43■■□□□ 1.02
LRCH4O75427 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC21.43■■□□□ 1.02
LRCH4O75427 GXYLT1P2-201ENST00000433312 1230 ntBASIC21.43■■□□□ 1.02
LRCH4O75427 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
LRCH4O75427 AL162430.1-201ENST00000480705 870 ntBASIC21.43■■□□□ 1.02
LRCH4O75427 SPI1-203ENST00000533030 661 ntTSL 2 BASIC21.43■■□□□ 1.02
LRCH4O75427 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC21.43■■□□□ 1.02
LRCH4O75427 WWOX-218ENST00000627394 894 ntTSL 5 BASIC21.43■■□□□ 1.02
LRCH4O75427 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
LRCH4O75427 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
LRCH4O75427 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
LRCH4O75427 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC21.43■■□□□ 1.02
LRCH4O75427 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
LRCH4O75427 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
LRCH4O75427 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
LRCH4O75427 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
LRCH4O75427 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC21.43■■□□□ 1.02
LRCH4O75427 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
LRCH4O75427 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
LRCH4O75427 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
LRCH4O75427 AC007322.3-201ENST00000426526 701 ntBASIC21.42■■□□□ 1.02
LRCH4O75427 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC21.42■■□□□ 1.02
LRCH4O75427 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC21.42■■□□□ 1.02
LRCH4O75427 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC21.42■■□□□ 1.02
LRCH4O75427 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
LRCH4O75427 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
LRCH4O75427 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC21.42■■□□□ 1.02
LRCH4O75427 MIR5787-201ENST00000611784 55 ntBASIC21.42■■□□□ 1.02
LRCH4O75427 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
LRCH4O75427 AC020907.5-201ENST00000624372 1936 ntBASIC21.42■■□□□ 1.02
LRCH4O75427 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
LRCH4O75427 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC21.41■■□□□ 1.02
LRCH4O75427 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC21.41■■□□□ 1.02
LRCH4O75427 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
LRCH4O75427 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC21.41■■□□□ 1.02
LRCH4O75427 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
LRCH4O75427 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
LRCH4O75427 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC21.41■■□□□ 1.02
LRCH4O75427 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
LRCH4O75427 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC21.41■■□□□ 1.02
LRCH4O75427 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC21.41■■□□□ 1.02
LRCH4O75427 KRT18P11-201ENST00000435214 1283 ntBASIC21.41■■□□□ 1.02
LRCH4O75427 TERF1P5-201ENST00000477545 1207 ntBASIC21.41■■□□□ 1.02
LRCH4O75427 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC21.41■■□□□ 1.02
LRCH4O75427 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
LRCH4O75427 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
LRCH4O75427 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
LRCH4O75427 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
LRCH4O75427 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC21.41■■□□□ 1.02
LRCH4O75427 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
LRCH4O75427 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC21.41■■□□□ 1.02
LRCH4O75427 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC21.41■■□□□ 1.02
LRCH4O75427 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC21.41■■□□□ 1.02
LRCH4O75427 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
LRCH4O75427 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
LRCH4O75427 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
LRCH4O75427 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
LRCH4O75427 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
LRCH4O75427 ME3-201ENST00000323418 1068 ntTSL 5 BASIC21.4■■□□□ 1.02
LRCH4O75427 AC006015.1-201ENST00000429970 570 ntBASIC21.4■■□□□ 1.02
LRCH4O75427 MFSD11-216ENST00000590393 1141 ntBASIC21.4■■□□□ 1.02
LRCH4O75427 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC21.4■■□□□ 1.02
LRCH4O75427 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
LRCH4O75427 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
LRCH4O75427 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC21.4■■□□□ 1.02
LRCH4O75427 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
LRCH4O75427 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC21.4■■□□□ 1.02
LRCH4O75427 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
LRCH4O75427 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC21.39■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms