Protein–RNA interactions for Protein: O60563

CCNT1, Cyclin-T1, humanhuman

Known RBP Predictions only

Length 726 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNT1O60563 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC23.39■■□□□ 1.33
CCNT1O60563 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC23.39■■□□□ 1.33
CCNT1O60563 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC23.39■■□□□ 1.33
CCNT1O60563 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
CCNT1O60563 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
CCNT1O60563 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC23.39■■□□□ 1.33
CCNT1O60563 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC23.39■■□□□ 1.33
CCNT1O60563 STAC-204ENST00000457375 1366 ntTSL 2 BASIC23.39■■□□□ 1.33
CCNT1O60563 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
CCNT1O60563 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
CCNT1O60563 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC23.38■■□□□ 1.33
CCNT1O60563 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
CCNT1O60563 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC23.38■■□□□ 1.33
CCNT1O60563 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC23.38■■□□□ 1.33
CCNT1O60563 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC23.38■■□□□ 1.33
CCNT1O60563 BET1L-204ENST00000410108 637 ntTSL 3 BASIC23.38■■□□□ 1.33
CCNT1O60563 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC23.38■■□□□ 1.33
CCNT1O60563 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC23.38■■□□□ 1.33
CCNT1O60563 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC23.38■■□□□ 1.33
CCNT1O60563 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC23.38■■□□□ 1.33
CCNT1O60563 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
CCNT1O60563 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC23.38■■□□□ 1.33
CCNT1O60563 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
CCNT1O60563 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
CCNT1O60563 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC23.37■■□□□ 1.33
CCNT1O60563 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
CCNT1O60563 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC23.37■■□□□ 1.33
CCNT1O60563 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC23.37■■□□□ 1.33
CCNT1O60563 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC23.37■■□□□ 1.33
CCNT1O60563 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC23.37■■□□□ 1.33
CCNT1O60563 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
CCNT1O60563 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC23.37■■□□□ 1.33
CCNT1O60563 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
CCNT1O60563 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
CCNT1O60563 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC23.37■■□□□ 1.33
CCNT1O60563 VMO1-204ENST00000441199 741 ntTSL 2 BASIC23.37■■□□□ 1.33
CCNT1O60563 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
CCNT1O60563 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
CCNT1O60563 AL050303.2-201ENST00000619798 666 ntBASIC23.37■■□□□ 1.33
CCNT1O60563 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC23.37■■□□□ 1.33
CCNT1O60563 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC23.37■■□□□ 1.33
CCNT1O60563 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC23.37■■□□□ 1.33
CCNT1O60563 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC23.37■■□□□ 1.33
CCNT1O60563 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC23.37■■□□□ 1.33
CCNT1O60563 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
CCNT1O60563 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC23.36■■□□□ 1.33
CCNT1O60563 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC23.36■■□□□ 1.33
CCNT1O60563 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC23.36■■□□□ 1.33
CCNT1O60563 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
CCNT1O60563 RARRES2P4-201ENST00000514074 484 ntBASIC23.36■■□□□ 1.33
CCNT1O60563 AC090192.1-201ENST00000517740 490 ntBASIC23.36■■□□□ 1.33
CCNT1O60563 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC23.36■■□□□ 1.33
CCNT1O60563 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC23.36■■□□□ 1.33
CCNT1O60563 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC23.36■■□□□ 1.33
CCNT1O60563 AC069236.1-201ENST00000604339 616 ntBASIC23.36■■□□□ 1.33
CCNT1O60563 AC008694.1-202ENST00000636953 945 ntBASIC23.36■■□□□ 1.33
CCNT1O60563 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
CCNT1O60563 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
CCNT1O60563 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC23.36■■□□□ 1.33
CCNT1O60563 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
CCNT1O60563 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC23.36■■□□□ 1.33
CCNT1O60563 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC23.36■■□□□ 1.33
CCNT1O60563 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
CCNT1O60563 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
CCNT1O60563 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
CCNT1O60563 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC23.35■■□□□ 1.33
CCNT1O60563 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
CCNT1O60563 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
CCNT1O60563 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
CCNT1O60563 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC23.35■■□□□ 1.33
CCNT1O60563 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
CCNT1O60563 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
CCNT1O60563 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC23.35■■□□□ 1.33
CCNT1O60563 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC23.35■■□□□ 1.33
CCNT1O60563 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC23.34■■□□□ 1.33
CCNT1O60563 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC23.34■■□□□ 1.33
CCNT1O60563 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC23.34■■□□□ 1.33
CCNT1O60563 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC23.34■■□□□ 1.33
CCNT1O60563 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
CCNT1O60563 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC23.34■■□□□ 1.33
CCNT1O60563 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
CCNT1O60563 AC006970.2-201ENST00000450065 779 ntBASIC23.34■■□□□ 1.33
CCNT1O60563 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC23.34■■□□□ 1.33
CCNT1O60563 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC23.34■■□□□ 1.33
CCNT1O60563 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
CCNT1O60563 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC23.34■■□□□ 1.33
CCNT1O60563 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC23.34■■□□□ 1.33
CCNT1O60563 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC23.34■■□□□ 1.33
CCNT1O60563 AC027702.1-201ENST00000563810 1770 ntBASIC23.34■■□□□ 1.33
CCNT1O60563 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
CCNT1O60563 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC23.34■■□□□ 1.33
CCNT1O60563 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
CCNT1O60563 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC23.34■■□□□ 1.33
CCNT1O60563 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC23.33■■□□□ 1.33
CCNT1O60563 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC23.33■■□□□ 1.33
CCNT1O60563 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
CCNT1O60563 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
CCNT1O60563 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC23.33■■□□□ 1.33
CCNT1O60563 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.33
CCNT1O60563 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms