Protein–RNA interactions for Protein: O60548

FOXD2, Forkhead box protein D2, humanhuman

Predicted RBP Predictions only

Length 495 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXD2O60548 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC20.68■□□□□ 0.9
FOXD2O60548 FAM21FP-204ENST00000608637 956 ntBASIC20.68■□□□□ 0.9
FOXD2O60548 AL135905.2-201ENST00000584934 1404 ntBASIC20.68■□□□□ 0.9
FOXD2O60548 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
FOXD2O60548 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC20.67■□□□□ 0.9
FOXD2O60548 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
FOXD2O60548 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC20.67■□□□□ 0.9
FOXD2O60548 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
FOXD2O60548 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC20.67■□□□□ 0.9
FOXD2O60548 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC20.67■□□□□ 0.9
FOXD2O60548 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC20.67■□□□□ 0.9
FOXD2O60548 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC20.67■□□□□ 0.9
FOXD2O60548 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC20.67■□□□□ 0.9
FOXD2O60548 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC20.67■□□□□ 0.9
FOXD2O60548 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
FOXD2O60548 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
FOXD2O60548 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC20.67■□□□□ 0.9
FOXD2O60548 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC20.67■□□□□ 0.9
FOXD2O60548 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
FOXD2O60548 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
FOXD2O60548 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
FOXD2O60548 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
FOXD2O60548 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC20.66■□□□□ 0.9
FOXD2O60548 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
FOXD2O60548 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
FOXD2O60548 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
FOXD2O60548 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
FOXD2O60548 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
FOXD2O60548 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC20.66■□□□□ 0.9
FOXD2O60548 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
FOXD2O60548 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
FOXD2O60548 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
FOXD2O60548 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC20.66■□□□□ 0.9
FOXD2O60548 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC20.66■□□□□ 0.9
FOXD2O60548 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC20.66■□□□□ 0.9
FOXD2O60548 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC20.66■□□□□ 0.9
FOXD2O60548 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC20.66■□□□□ 0.9
FOXD2O60548 AC092368.3-202ENST00000574180 1591 ntBASIC20.66■□□□□ 0.9
FOXD2O60548 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
FOXD2O60548 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
FOXD2O60548 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
FOXD2O60548 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
FOXD2O60548 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC20.66■□□□□ 0.9
FOXD2O60548 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
FOXD2O60548 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
FOXD2O60548 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
FOXD2O60548 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
FOXD2O60548 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
FOXD2O60548 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
FOXD2O60548 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
FOXD2O60548 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
FOXD2O60548 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
FOXD2O60548 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC20.65■□□□□ 0.9
FOXD2O60548 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC20.65■□□□□ 0.9
FOXD2O60548 OR2A1-AS1-207ENST00000486094 819 ntBASIC20.65■□□□□ 0.9
FOXD2O60548 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
FOXD2O60548 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
FOXD2O60548 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
FOXD2O60548 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
FOXD2O60548 MIR4785-201ENST00000585005 73 ntBASIC20.65■□□□□ 0.9
FOXD2O60548 AC069544.1-201ENST00000609399 999 ntBASIC20.65■□□□□ 0.9
FOXD2O60548 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
FOXD2O60548 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
FOXD2O60548 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
FOXD2O60548 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
FOXD2O60548 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC20.65■□□□□ 0.9
FOXD2O60548 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC20.65■□□□□ 0.9
FOXD2O60548 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
FOXD2O60548 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
FOXD2O60548 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
FOXD2O60548 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC20.64■□□□□ 0.9
FOXD2O60548 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
FOXD2O60548 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC20.64■□□□□ 0.9
FOXD2O60548 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
FOXD2O60548 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
FOXD2O60548 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC20.64■□□□□ 0.89
FOXD2O60548 RPS2P55-201ENST00000397318 883 ntBASIC20.64■□□□□ 0.89
FOXD2O60548 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC20.64■□□□□ 0.89
FOXD2O60548 AC107956.1-201ENST00000494359 873 ntBASIC20.64■□□□□ 0.89
FOXD2O60548 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC20.64■□□□□ 0.89
FOXD2O60548 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC20.64■□□□□ 0.89
FOXD2O60548 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
FOXD2O60548 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC20.64■□□□□ 0.89
FOXD2O60548 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
FOXD2O60548 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
FOXD2O60548 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
FOXD2O60548 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC20.63■□□□□ 0.89
FOXD2O60548 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC20.63■□□□□ 0.89
FOXD2O60548 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
FOXD2O60548 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
FOXD2O60548 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC20.63■□□□□ 0.89
FOXD2O60548 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
FOXD2O60548 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
FOXD2O60548 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
FOXD2O60548 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
FOXD2O60548 CDV3P1-201ENST00000471403 739 ntBASIC20.63■□□□□ 0.89
FOXD2O60548 DHDH-203ENST00000522614 776 ntTSL 5 BASIC20.63■□□□□ 0.89
FOXD2O60548 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC20.63■□□□□ 0.89
FOXD2O60548 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC20.63■□□□□ 0.89
FOXD2O60548 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms