Protein–RNA interactions for Protein: O43543

XRCC2, DNA repair protein XRCC2, humanhuman

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC2O43543 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC17.84■□□□□ 0.45
XRCC2O43543 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC17.84■□□□□ 0.45
XRCC2O43543 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
XRCC2O43543 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC17.84■□□□□ 0.45
XRCC2O43543 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
XRCC2O43543 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
XRCC2O43543 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
XRCC2O43543 PTPA-214ENST00000423100 988 ntTSL 2 BASIC17.84■□□□□ 0.45
XRCC2O43543 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
XRCC2O43543 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
XRCC2O43543 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC17.84■□□□□ 0.45
XRCC2O43543 PLD4-205ENST00000553861 667 ntTSL 2 BASIC17.84■□□□□ 0.45
XRCC2O43543 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
XRCC2O43543 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC17.84■□□□□ 0.45
XRCC2O43543 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC17.84■□□□□ 0.45
XRCC2O43543 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
XRCC2O43543 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC17.84■□□□□ 0.45
XRCC2O43543 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC17.84■□□□□ 0.45
XRCC2O43543 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
XRCC2O43543 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
XRCC2O43543 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
XRCC2O43543 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
XRCC2O43543 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
XRCC2O43543 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC17.84■□□□□ 0.45
XRCC2O43543 AC116050.2-201ENST00000612102 1779 ntBASIC17.84■□□□□ 0.45
XRCC2O43543 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC17.83■□□□□ 0.45
XRCC2O43543 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC17.83■□□□□ 0.45
XRCC2O43543 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
XRCC2O43543 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
XRCC2O43543 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
XRCC2O43543 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.45
XRCC2O43543 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
XRCC2O43543 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
XRCC2O43543 STAC-204ENST00000457375 1366 ntTSL 2 BASIC17.83■□□□□ 0.45
XRCC2O43543 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
XRCC2O43543 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
XRCC2O43543 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
XRCC2O43543 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC17.83■□□□□ 0.44
XRCC2O43543 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC17.83■□□□□ 0.44
XRCC2O43543 NTF6G-201ENST00000591094 616 ntBASIC17.83■□□□□ 0.44
XRCC2O43543 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC17.83■□□□□ 0.44
XRCC2O43543 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
XRCC2O43543 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC17.83■□□□□ 0.44
XRCC2O43543 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
XRCC2O43543 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
XRCC2O43543 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
XRCC2O43543 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
XRCC2O43543 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
XRCC2O43543 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
XRCC2O43543 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
XRCC2O43543 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
XRCC2O43543 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
XRCC2O43543 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
XRCC2O43543 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
XRCC2O43543 HACD1-201ENST00000326961 773 ntTSL 2 BASIC17.82■□□□□ 0.44
XRCC2O43543 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
XRCC2O43543 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC17.82■□□□□ 0.44
XRCC2O43543 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC17.82■□□□□ 0.44
XRCC2O43543 FGF8-207ENST00000618991 856 ntTSL 3 BASIC17.82■□□□□ 0.44
XRCC2O43543 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
XRCC2O43543 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
XRCC2O43543 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
XRCC2O43543 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
XRCC2O43543 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
XRCC2O43543 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
XRCC2O43543 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
XRCC2O43543 AC007225.1-201ENST00000566331 1836 ntBASIC17.82■□□□□ 0.44
XRCC2O43543 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
XRCC2O43543 AC019069.1-201ENST00000610008 1333 ntBASIC17.81■□□□□ 0.44
XRCC2O43543 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
XRCC2O43543 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
XRCC2O43543 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
XRCC2O43543 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC17.81■□□□□ 0.44
XRCC2O43543 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC17.81■□□□□ 0.44
XRCC2O43543 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC17.81■□□□□ 0.44
XRCC2O43543 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC17.81■□□□□ 0.44
XRCC2O43543 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC17.81■□□□□ 0.44
XRCC2O43543 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
XRCC2O43543 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC17.81■□□□□ 0.44
XRCC2O43543 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
XRCC2O43543 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
XRCC2O43543 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
XRCC2O43543 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
XRCC2O43543 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
XRCC2O43543 RBM17P2-201ENST00000616397 1405 ntBASIC17.81■□□□□ 0.44
XRCC2O43543 FEM1AP1-201ENST00000431297 1995 ntBASIC17.8■□□□□ 0.44
XRCC2O43543 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
XRCC2O43543 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC17.8■□□□□ 0.44
XRCC2O43543 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC17.8■□□□□ 0.44
XRCC2O43543 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
XRCC2O43543 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC17.8■□□□□ 0.44
XRCC2O43543 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
XRCC2O43543 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
XRCC2O43543 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC17.8■□□□□ 0.44
XRCC2O43543 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC17.8■□□□□ 0.44
XRCC2O43543 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC17.8■□□□□ 0.44
XRCC2O43543 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC17.8■□□□□ 0.44
XRCC2O43543 KRT18P61-201ENST00000585825 1298 ntBASIC17.8■□□□□ 0.44
XRCC2O43543 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC17.8■□□□□ 0.44
XRCC2O43543 UBE2DNL-204ENST00000602536 740 ntBASIC17.8■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 18 ms