Protein–RNA interactions for Protein: O43353

RIPK2, Receptor-interacting serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK2O43353 AL020996.1-203ENST00000536896 2307 ntBASIC20.89■□□□□ 0.93
RIPK2O43353 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC20.89■□□□□ 0.93
RIPK2O43353 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
RIPK2O43353 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
RIPK2O43353 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
RIPK2O43353 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RIPK2O43353 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
RIPK2O43353 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
RIPK2O43353 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
RIPK2O43353 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RIPK2O43353 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC20.88■□□□□ 0.93
RIPK2O43353 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
RIPK2O43353 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
RIPK2O43353 AC125437.2-201ENST00000625180 2167 ntBASIC20.88■□□□□ 0.93
RIPK2O43353 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RIPK2O43353 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RIPK2O43353 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RIPK2O43353 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
RIPK2O43353 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
RIPK2O43353 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RIPK2O43353 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC20.88■□□□□ 0.93
RIPK2O43353 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
RIPK2O43353 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RIPK2O43353 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC20.88■□□□□ 0.93
RIPK2O43353 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
RIPK2O43353 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
RIPK2O43353 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RIPK2O43353 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
RIPK2O43353 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
RIPK2O43353 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RIPK2O43353 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
RIPK2O43353 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
RIPK2O43353 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RIPK2O43353 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
RIPK2O43353 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
RIPK2O43353 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
RIPK2O43353 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RIPK2O43353 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
RIPK2O43353 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC20.87■□□□□ 0.93
RIPK2O43353 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
RIPK2O43353 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RIPK2O43353 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC20.86■□□□□ 0.93
RIPK2O43353 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
RIPK2O43353 TRIR-202ENST00000588213 841 ntTSL 3 BASIC20.86■□□□□ 0.93
RIPK2O43353 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC20.86■□□□□ 0.93
RIPK2O43353 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC20.86■□□□□ 0.93
RIPK2O43353 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC20.86■□□□□ 0.93
RIPK2O43353 AP004607.4-201ENST00000530158 1459 ntBASIC20.86■□□□□ 0.93
RIPK2O43353 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC20.86■□□□□ 0.93
RIPK2O43353 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
RIPK2O43353 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RIPK2O43353 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC20.86■□□□□ 0.93
RIPK2O43353 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
RIPK2O43353 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC20.85■□□□□ 0.93
RIPK2O43353 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC20.85■□□□□ 0.93
RIPK2O43353 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RIPK2O43353 AC061975.6-201ENST00000579045 1553 ntBASIC20.85■□□□□ 0.93
RIPK2O43353 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
RIPK2O43353 AC018445.3-201ENST00000624177 1945 ntBASIC20.85■□□□□ 0.93
RIPK2O43353 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
RIPK2O43353 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC20.85■□□□□ 0.93
RIPK2O43353 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RIPK2O43353 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC20.85■□□□□ 0.93
RIPK2O43353 IGHV3-19-201ENST00000521488 291 ntBASIC20.85■□□□□ 0.93
RIPK2O43353 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC20.85■□□□□ 0.93
RIPK2O43353 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC20.85■□□□□ 0.93
RIPK2O43353 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC20.85■□□□□ 0.93
RIPK2O43353 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
RIPK2O43353 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RIPK2O43353 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RIPK2O43353 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
RIPK2O43353 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
RIPK2O43353 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
RIPK2O43353 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
RIPK2O43353 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RIPK2O43353 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC20.84■□□□□ 0.93
RIPK2O43353 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC20.84■□□□□ 0.93
RIPK2O43353 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC20.84■□□□□ 0.93
RIPK2O43353 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RIPK2O43353 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
RIPK2O43353 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
RIPK2O43353 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
RIPK2O43353 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC20.84■□□□□ 0.93
RIPK2O43353 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RIPK2O43353 EEF1DP3-203ENST00000566025 782 ntBASIC20.84■□□□□ 0.93
RIPK2O43353 AC233992.3-201ENST00000607491 485 ntBASIC20.84■□□□□ 0.93
RIPK2O43353 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC20.84■□□□□ 0.93
RIPK2O43353 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RIPK2O43353 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
RIPK2O43353 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RIPK2O43353 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC20.84■□□□□ 0.93
RIPK2O43353 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC20.84■□□□□ 0.93
RIPK2O43353 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
RIPK2O43353 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
RIPK2O43353 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
RIPK2O43353 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RIPK2O43353 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
RIPK2O43353 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
RIPK2O43353 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
RIPK2O43353 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms