Protein–RNA interactions for Protein: O15230

LAMA5, Laminin subunit alpha-5, humanhuman

Predictions only

Length 3,695 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA5O15230 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC19.28■□□□□ 0.68
LAMA5O15230 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
LAMA5O15230 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
LAMA5O15230 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC19.28■□□□□ 0.68
LAMA5O15230 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
LAMA5O15230 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
LAMA5O15230 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC19.28■□□□□ 0.68
LAMA5O15230 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC19.28■□□□□ 0.68
LAMA5O15230 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
LAMA5O15230 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
LAMA5O15230 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC19.27■□□□□ 0.68
LAMA5O15230 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
LAMA5O15230 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC19.27■□□□□ 0.68
LAMA5O15230 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
LAMA5O15230 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC19.27■□□□□ 0.68
LAMA5O15230 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC19.27■□□□□ 0.68
LAMA5O15230 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC19.27■□□□□ 0.68
LAMA5O15230 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
LAMA5O15230 AC124283.5-201ENST00000624661 1809 ntBASIC19.27■□□□□ 0.68
LAMA5O15230 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
LAMA5O15230 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
LAMA5O15230 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
LAMA5O15230 NXN-202ENST00000537628 1340 ntTSL 3 BASIC19.27■□□□□ 0.68
LAMA5O15230 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC19.27■□□□□ 0.68
LAMA5O15230 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC19.27■□□□□ 0.68
LAMA5O15230 DUSP5P1-201ENST00000441325 1139 ntBASIC19.27■□□□□ 0.68
LAMA5O15230 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC19.27■□□□□ 0.68
LAMA5O15230 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC19.27■□□□□ 0.68
LAMA5O15230 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC19.27■□□□□ 0.68
LAMA5O15230 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC19.27■□□□□ 0.68
LAMA5O15230 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC19.27■□□□□ 0.68
LAMA5O15230 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
LAMA5O15230 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.67
LAMA5O15230 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
LAMA5O15230 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
LAMA5O15230 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
LAMA5O15230 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
LAMA5O15230 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
LAMA5O15230 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
LAMA5O15230 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
LAMA5O15230 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
LAMA5O15230 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC19.26■□□□□ 0.67
LAMA5O15230 AC105020.6-201ENST00000621523 1217 ntBASIC19.26■□□□□ 0.67
LAMA5O15230 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
LAMA5O15230 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
LAMA5O15230 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC19.26■□□□□ 0.67
LAMA5O15230 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC19.26■□□□□ 0.67
LAMA5O15230 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC19.26■□□□□ 0.67
LAMA5O15230 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC19.25■□□□□ 0.67
LAMA5O15230 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC19.25■□□□□ 0.67
LAMA5O15230 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC19.25■□□□□ 0.67
LAMA5O15230 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
LAMA5O15230 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC19.25■□□□□ 0.67
LAMA5O15230 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC19.25■□□□□ 0.67
LAMA5O15230 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC19.25■□□□□ 0.67
LAMA5O15230 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
LAMA5O15230 VMO1-204ENST00000441199 741 ntTSL 2 BASIC19.25■□□□□ 0.67
LAMA5O15230 TERT-206ENST00000508104 2486 ntTSL 5 BASIC19.25■□□□□ 0.67
LAMA5O15230 AC010542.4-201ENST00000563151 1910 ntBASIC19.25■□□□□ 0.67
LAMA5O15230 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
LAMA5O15230 COPS8-203ENST00000409334 794 ntTSL 5 BASIC19.24■□□□□ 0.67
LAMA5O15230 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
LAMA5O15230 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
LAMA5O15230 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
LAMA5O15230 NUDT16P1-203ENST00000513809 620 ntBASIC19.24■□□□□ 0.67
LAMA5O15230 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC19.24■□□□□ 0.67
LAMA5O15230 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
LAMA5O15230 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
LAMA5O15230 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC19.24■□□□□ 0.67
LAMA5O15230 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
LAMA5O15230 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
LAMA5O15230 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
LAMA5O15230 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
LAMA5O15230 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC19.24■□□□□ 0.67
LAMA5O15230 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
LAMA5O15230 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
LAMA5O15230 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
LAMA5O15230 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
LAMA5O15230 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
LAMA5O15230 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
LAMA5O15230 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC19.24■□□□□ 0.67
LAMA5O15230 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
LAMA5O15230 GLDC-219ENST00000640208 420 ntTSL 2 BASIC19.24■□□□□ 0.67
LAMA5O15230 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
LAMA5O15230 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC19.24■□□□□ 0.67
LAMA5O15230 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
LAMA5O15230 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC19.24■□□□□ 0.67
LAMA5O15230 AC079598.2-202ENST00000546624 1451 ntBASIC19.24■□□□□ 0.67
LAMA5O15230 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
LAMA5O15230 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
LAMA5O15230 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
LAMA5O15230 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC19.23■□□□□ 0.67
LAMA5O15230 MYC-208ENST00000641036 567 ntBASIC19.23■□□□□ 0.67
LAMA5O15230 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC19.23■□□□□ 0.67
LAMA5O15230 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
LAMA5O15230 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
LAMA5O15230 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
LAMA5O15230 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC19.23■□□□□ 0.67
LAMA5O15230 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
LAMA5O15230 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms