Protein–RNA interactions for Protein: O14917

PCDH17, Protocadherin-17, humanhuman

Predictions only

Length 1,159 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH17O14917 RBM17P2-201ENST00000616397 1405 ntBASIC19.6■□□□□ 0.73
PCDH17O14917 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PCDH17O14917 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
PCDH17O14917 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
PCDH17O14917 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
PCDH17O14917 SLC29A4P1-201ENST00000398760 971 ntBASIC19.6■□□□□ 0.73
PCDH17O14917 AL355802.2-201ENST00000402069 882 ntBASIC19.6■□□□□ 0.73
PCDH17O14917 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
PCDH17O14917 AL591742.1-201ENST00000604433 565 ntBASIC19.6■□□□□ 0.73
PCDH17O14917 AL050303.2-201ENST00000619798 666 ntBASIC19.6■□□□□ 0.73
PCDH17O14917 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
PCDH17O14917 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC19.6■□□□□ 0.73
PCDH17O14917 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PCDH17O14917 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
PCDH17O14917 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC19.6■□□□□ 0.73
PCDH17O14917 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PCDH17O14917 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC19.6■□□□□ 0.73
PCDH17O14917 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
PCDH17O14917 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
PCDH17O14917 AC068338.2-201ENST00000563278 1430 ntBASIC19.59■□□□□ 0.73
PCDH17O14917 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PCDH17O14917 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PCDH17O14917 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PCDH17O14917 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
PCDH17O14917 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC19.59■□□□□ 0.73
PCDH17O14917 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
PCDH17O14917 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
PCDH17O14917 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC19.59■□□□□ 0.73
PCDH17O14917 AL512625.2-201ENST00000417533 625 ntBASIC19.59■□□□□ 0.73
PCDH17O14917 TSPY6P-201ENST00000448518 926 ntBASIC19.59■□□□□ 0.73
PCDH17O14917 PBX1-209ENST00000485769 834 ntTSL 2 BASIC19.59■□□□□ 0.73
PCDH17O14917 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
PCDH17O14917 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC19.59■□□□□ 0.73
PCDH17O14917 AL121603.2-201ENST00000557373 2117 ntBASIC19.59■□□□□ 0.73
PCDH17O14917 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC19.59■□□□□ 0.73
PCDH17O14917 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC19.59■□□□□ 0.73
PCDH17O14917 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC19.59■□□□□ 0.73
PCDH17O14917 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC19.59■□□□□ 0.73
PCDH17O14917 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC19.59■□□□□ 0.73
PCDH17O14917 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PCDH17O14917 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
PCDH17O14917 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PCDH17O14917 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
PCDH17O14917 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
PCDH17O14917 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
PCDH17O14917 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC19.58■□□□□ 0.73
PCDH17O14917 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC19.58■□□□□ 0.73
PCDH17O14917 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
PCDH17O14917 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
PCDH17O14917 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
PCDH17O14917 METTL15-202ENST00000403099 795 ntTSL 5 BASIC19.58■□□□□ 0.72
PCDH17O14917 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC19.58■□□□□ 0.72
PCDH17O14917 AC245052.3-201ENST00000450182 901 ntBASIC19.58■□□□□ 0.72
PCDH17O14917 AC142086.2-201ENST00000569753 217 ntBASIC19.58■□□□□ 0.72
PCDH17O14917 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
PCDH17O14917 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC19.58■□□□□ 0.72
PCDH17O14917 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
PCDH17O14917 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC19.58■□□□□ 0.72
PCDH17O14917 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
PCDH17O14917 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
PCDH17O14917 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
PCDH17O14917 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
PCDH17O14917 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
PCDH17O14917 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PCDH17O14917 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
PCDH17O14917 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
PCDH17O14917 AC061975.6-201ENST00000579045 1553 ntBASIC19.57■□□□□ 0.72
PCDH17O14917 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
PCDH17O14917 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PCDH17O14917 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC19.57■□□□□ 0.72
PCDH17O14917 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
PCDH17O14917 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PCDH17O14917 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PCDH17O14917 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
PCDH17O14917 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
PCDH17O14917 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC19.57■□□□□ 0.72
PCDH17O14917 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
PCDH17O14917 UQCRFS1P1-201ENST00000435169 820 ntBASIC19.57■□□□□ 0.72
PCDH17O14917 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC19.57■□□□□ 0.72
PCDH17O14917 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC19.57■□□□□ 0.72
PCDH17O14917 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC19.57■□□□□ 0.72
PCDH17O14917 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC19.57■□□□□ 0.72
PCDH17O14917 FGF8-207ENST00000618991 856 ntTSL 3 BASIC19.57■□□□□ 0.72
PCDH17O14917 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
PCDH17O14917 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC19.57■□□□□ 0.72
PCDH17O14917 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
PCDH17O14917 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC19.57■□□□□ 0.72
PCDH17O14917 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC19.57■□□□□ 0.72
PCDH17O14917 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
PCDH17O14917 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC19.56■□□□□ 0.72
PCDH17O14917 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PCDH17O14917 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PCDH17O14917 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC19.56■□□□□ 0.72
PCDH17O14917 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
PCDH17O14917 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC19.56■□□□□ 0.72
PCDH17O14917 CYP2T1P-201ENST00000432607 1285 ntBASIC19.56■□□□□ 0.72
PCDH17O14917 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
PCDH17O14917 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC19.56■□□□□ 0.72
PCDH17O14917 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
PCDH17O14917 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms