Protein–RNA interactions for Protein: O14815

CAPN9, Calpain-9, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN9O14815 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
CAPN9O14815 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CAPN9O14815 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CAPN9O14815 AL121603.2-201ENST00000557373 2117 ntBASIC21.68■■□□□ 1.06
CAPN9O14815 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
CAPN9O14815 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CAPN9O14815 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
CAPN9O14815 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CAPN9O14815 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC21.67■■□□□ 1.06
CAPN9O14815 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CAPN9O14815 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CAPN9O14815 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
CAPN9O14815 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
CAPN9O14815 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CAPN9O14815 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
CAPN9O14815 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC21.67■■□□□ 1.06
CAPN9O14815 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CAPN9O14815 PTPA-214ENST00000423100 988 ntTSL 2 BASIC21.67■■□□□ 1.06
CAPN9O14815 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC21.67■■□□□ 1.06
CAPN9O14815 AL591742.1-201ENST00000604433 565 ntBASIC21.67■■□□□ 1.06
CAPN9O14815 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
CAPN9O14815 PARP1-210ENST00000629232 477 ntTSL 5 BASIC21.67■■□□□ 1.06
CAPN9O14815 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CAPN9O14815 AC005229.4-201ENST00000610085 2198 ntBASIC21.67■■□□□ 1.06
CAPN9O14815 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
CAPN9O14815 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CAPN9O14815 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CAPN9O14815 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
CAPN9O14815 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CAPN9O14815 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC21.66■■□□□ 1.06
CAPN9O14815 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC21.66■■□□□ 1.06
CAPN9O14815 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
CAPN9O14815 CDV3P1-201ENST00000471403 739 ntBASIC21.66■■□□□ 1.06
CAPN9O14815 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC21.66■■□□□ 1.06
CAPN9O14815 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC21.66■■□□□ 1.06
CAPN9O14815 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CAPN9O14815 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CAPN9O14815 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC21.66■■□□□ 1.06
CAPN9O14815 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC21.65■■□□□ 1.06
CAPN9O14815 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CAPN9O14815 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC21.65■■□□□ 1.06
CAPN9O14815 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
CAPN9O14815 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
CAPN9O14815 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
CAPN9O14815 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC21.65■■□□□ 1.06
CAPN9O14815 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC21.65■■□□□ 1.06
CAPN9O14815 AC116050.2-201ENST00000612102 1779 ntBASIC21.65■■□□□ 1.06
CAPN9O14815 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC21.65■■□□□ 1.06
CAPN9O14815 EXOC3-AS1-202ENST00000623673 1663 ntBASIC21.65■■□□□ 1.06
CAPN9O14815 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC21.65■■□□□ 1.06
CAPN9O14815 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CAPN9O14815 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC21.64■■□□□ 1.06
CAPN9O14815 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC21.64■■□□□ 1.06
CAPN9O14815 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.06
CAPN9O14815 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CAPN9O14815 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
CAPN9O14815 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CAPN9O14815 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.05
CAPN9O14815 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CAPN9O14815 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
CAPN9O14815 AC005181.1-201ENST00000604782 1256 ntBASIC21.64■■□□□ 1.05
CAPN9O14815 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC21.64■■□□□ 1.05
CAPN9O14815 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CAPN9O14815 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
CAPN9O14815 AC073130.3-201ENST00000624389 2278 ntBASIC21.64■■□□□ 1.05
CAPN9O14815 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC21.64■■□□□ 1.05
CAPN9O14815 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
CAPN9O14815 AC068338.2-201ENST00000563278 1430 ntBASIC21.63■■□□□ 1.05
CAPN9O14815 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
CAPN9O14815 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
CAPN9O14815 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CAPN9O14815 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC21.63■■□□□ 1.05
CAPN9O14815 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CAPN9O14815 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CAPN9O14815 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CAPN9O14815 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
CAPN9O14815 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CAPN9O14815 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
CAPN9O14815 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
CAPN9O14815 BET1L-204ENST00000410108 637 ntTSL 3 BASIC21.63■■□□□ 1.05
CAPN9O14815 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC21.63■■□□□ 1.05
CAPN9O14815 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CAPN9O14815 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC21.63■■□□□ 1.05
CAPN9O14815 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CAPN9O14815 RAP2CP1-201ENST00000605103 478 ntBASIC21.63■■□□□ 1.05
CAPN9O14815 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
CAPN9O14815 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CAPN9O14815 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC21.63■■□□□ 1.05
CAPN9O14815 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CAPN9O14815 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC21.63■■□□□ 1.05
CAPN9O14815 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CAPN9O14815 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CAPN9O14815 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC21.63■■□□□ 1.05
CAPN9O14815 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CAPN9O14815 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CAPN9O14815 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC21.62■■□□□ 1.05
CAPN9O14815 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CAPN9O14815 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CAPN9O14815 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
CAPN9O14815 AC007322.3-201ENST00000426526 701 ntBASIC21.62■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms