Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.71
PDLIM1O00151 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.71
PDLIM1O00151 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
PDLIM1O00151 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
PDLIM1O00151 WAC-202ENST00000347934 2839 ntTSL 5 BASIC19.52■□□□□ 0.71
PDLIM1O00151 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.71
PDLIM1O00151 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PDLIM1O00151 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC19.51■□□□□ 0.71
PDLIM1O00151 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
PDLIM1O00151 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
PDLIM1O00151 SNX3-202ENST00000349379 890 ntTSL 2 BASIC19.51■□□□□ 0.71
PDLIM1O00151 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC19.51■□□□□ 0.71
PDLIM1O00151 GRAMD4P4-201ENST00000613563 1115 ntBASIC19.51■□□□□ 0.71
PDLIM1O00151 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC19.51■□□□□ 0.71
PDLIM1O00151 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC19.51■□□□□ 0.71
PDLIM1O00151 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC19.51■□□□□ 0.71
PDLIM1O00151 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC19.51■□□□□ 0.71
PDLIM1O00151 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC19.51■□□□□ 0.71
PDLIM1O00151 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
PDLIM1O00151 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PDLIM1O00151 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PDLIM1O00151 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PDLIM1O00151 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
PDLIM1O00151 AC020907.5-201ENST00000624372 1936 ntBASIC19.51■□□□□ 0.71
PDLIM1O00151 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PDLIM1O00151 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PDLIM1O00151 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC19.51■□□□□ 0.71
PDLIM1O00151 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PDLIM1O00151 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PDLIM1O00151 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
PDLIM1O00151 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PDLIM1O00151 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PDLIM1O00151 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
PDLIM1O00151 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
PDLIM1O00151 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PDLIM1O00151 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PDLIM1O00151 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC19.5■□□□□ 0.71
PDLIM1O00151 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
PDLIM1O00151 AP001330.3-201ENST00000520123 633 ntBASIC19.5■□□□□ 0.71
PDLIM1O00151 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC19.5■□□□□ 0.71
PDLIM1O00151 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
PDLIM1O00151 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
PDLIM1O00151 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
PDLIM1O00151 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
PDLIM1O00151 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC19.5■□□□□ 0.71
PDLIM1O00151 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
PDLIM1O00151 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC19.5■□□□□ 0.71
PDLIM1O00151 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC19.5■□□□□ 0.71
PDLIM1O00151 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
PDLIM1O00151 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PDLIM1O00151 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PDLIM1O00151 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC19.49■□□□□ 0.71
PDLIM1O00151 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PDLIM1O00151 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
PDLIM1O00151 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC19.49■□□□□ 0.71
PDLIM1O00151 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
PDLIM1O00151 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PDLIM1O00151 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC19.49■□□□□ 0.71
PDLIM1O00151 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC19.49■□□□□ 0.71
PDLIM1O00151 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PDLIM1O00151 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC19.49■□□□□ 0.71
PDLIM1O00151 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PDLIM1O00151 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC19.49■□□□□ 0.71
PDLIM1O00151 MIR939-201ENST00000401314 82 ntBASIC19.49■□□□□ 0.71
PDLIM1O00151 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
PDLIM1O00151 AL136967.2-201ENST00000623968 743 ntBASIC19.49■□□□□ 0.71
PDLIM1O00151 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
PDLIM1O00151 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PDLIM1O00151 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PDLIM1O00151 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC19.49■□□□□ 0.71
PDLIM1O00151 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC19.49■□□□□ 0.71
PDLIM1O00151 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PDLIM1O00151 USP39-204ENST00000409766 2033 ntTSL 2 BASIC19.49■□□□□ 0.71
PDLIM1O00151 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC19.49■□□□□ 0.71
PDLIM1O00151 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC19.49■□□□□ 0.71
PDLIM1O00151 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
PDLIM1O00151 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PDLIM1O00151 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC19.48■□□□□ 0.71
PDLIM1O00151 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
PDLIM1O00151 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PDLIM1O00151 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
PDLIM1O00151 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC19.48■□□□□ 0.71
PDLIM1O00151 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
PDLIM1O00151 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC19.48■□□□□ 0.71
PDLIM1O00151 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
PDLIM1O00151 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
PDLIM1O00151 OR2I1P-207ENST00000453522 948 ntBASIC19.48■□□□□ 0.71
PDLIM1O00151 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC19.48■□□□□ 0.71
PDLIM1O00151 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
PDLIM1O00151 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PDLIM1O00151 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
PDLIM1O00151 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PDLIM1O00151 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PDLIM1O00151 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC19.48■□□□□ 0.71
PDLIM1O00151 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
PDLIM1O00151 STX4-202ENST00000394998 1498 ntTSL 2 BASIC19.48■□□□□ 0.71
PDLIM1O00151 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PDLIM1O00151 DET1-207ENST00000564406 2315 ntTSL 2 BASIC19.47■□□□□ 0.71
PDLIM1O00151 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC19.47■□□□□ 0.71
PDLIM1O00151 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC19.47■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms