Protein–RNA interactions for Protein: K7ERE1

TMEM256-PLSCR3, TMEM256-PLSCR3 readthrough (NMD candidate), humanhuman

Predictions only

Length 68 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM256-PLSCR3K7ERE1 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
TMEM256-PLSCR3K7ERE1 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
TMEM256-PLSCR3K7ERE1 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC13.06□□□□□ -0.32
TMEM256-PLSCR3K7ERE1 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC13.06□□□□□ -0.32
TMEM256-PLSCR3K7ERE1 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
TMEM256-PLSCR3K7ERE1 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
TMEM256-PLSCR3K7ERE1 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC13.06□□□□□ -0.32
TMEM256-PLSCR3K7ERE1 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC13.06□□□□□ -0.32
TMEM256-PLSCR3K7ERE1 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
TMEM256-PLSCR3K7ERE1 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
TMEM256-PLSCR3K7ERE1 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
TMEM256-PLSCR3K7ERE1 AC099778.1-201ENST00000568593 1911 ntBASIC13.06□□□□□ -0.32
TMEM256-PLSCR3K7ERE1 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
TMEM256-PLSCR3K7ERE1 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
TMEM256-PLSCR3K7ERE1 AC121338.2-201ENST00000622535 1744 ntBASIC13.06□□□□□ -0.32
TMEM256-PLSCR3K7ERE1 ASB1-202ENST00000409297 878 ntTSL 5 BASIC13.06□□□□□ -0.32
TMEM256-PLSCR3K7ERE1 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC13.06□□□□□ -0.32
TMEM256-PLSCR3K7ERE1 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC13.06□□□□□ -0.32
TMEM256-PLSCR3K7ERE1 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
TMEM256-PLSCR3K7ERE1 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC13.06□□□□□ -0.32
TMEM256-PLSCR3K7ERE1 AC016575.1-201ENST00000607026 382 ntBASIC13.06□□□□□ -0.32
TMEM256-PLSCR3K7ERE1 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
TMEM256-PLSCR3K7ERE1 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
TMEM256-PLSCR3K7ERE1 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
TMEM256-PLSCR3K7ERE1 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
TMEM256-PLSCR3K7ERE1 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
TMEM256-PLSCR3K7ERE1 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
TMEM256-PLSCR3K7ERE1 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
TMEM256-PLSCR3K7ERE1 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
TMEM256-PLSCR3K7ERE1 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
TMEM256-PLSCR3K7ERE1 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
TMEM256-PLSCR3K7ERE1 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
TMEM256-PLSCR3K7ERE1 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
TMEM256-PLSCR3K7ERE1 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
TMEM256-PLSCR3K7ERE1 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
TMEM256-PLSCR3K7ERE1 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
TMEM256-PLSCR3K7ERE1 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
TMEM256-PLSCR3K7ERE1 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC13.05□□□□□ -0.32
TMEM256-PLSCR3K7ERE1 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
TMEM256-PLSCR3K7ERE1 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
TMEM256-PLSCR3K7ERE1 AL512408.1-201ENST00000569378 2000 ntBASIC13.05□□□□□ -0.32
TMEM256-PLSCR3K7ERE1 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
TMEM256-PLSCR3K7ERE1 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
TMEM256-PLSCR3K7ERE1 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
TMEM256-PLSCR3K7ERE1 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC13.05□□□□□ -0.32
TMEM256-PLSCR3K7ERE1 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC13.05□□□□□ -0.32
TMEM256-PLSCR3K7ERE1 CEP120-209ENST00000515110 606 ntTSL 3 BASIC13.05□□□□□ -0.32
TMEM256-PLSCR3K7ERE1 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
TMEM256-PLSCR3K7ERE1 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC13.05□□□□□ -0.32
TMEM256-PLSCR3K7ERE1 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
TMEM256-PLSCR3K7ERE1 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
TMEM256-PLSCR3K7ERE1 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
TMEM256-PLSCR3K7ERE1 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC13.05□□□□□ -0.32
TMEM256-PLSCR3K7ERE1 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
TMEM256-PLSCR3K7ERE1 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
TMEM256-PLSCR3K7ERE1 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
TMEM256-PLSCR3K7ERE1 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
TMEM256-PLSCR3K7ERE1 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC13.05□□□□□ -0.32
TMEM256-PLSCR3K7ERE1 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
TMEM256-PLSCR3K7ERE1 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC13.05□□□□□ -0.32
TMEM256-PLSCR3K7ERE1 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC13.05□□□□□ -0.32
TMEM256-PLSCR3K7ERE1 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
TMEM256-PLSCR3K7ERE1 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
TMEM256-PLSCR3K7ERE1 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
TMEM256-PLSCR3K7ERE1 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
TMEM256-PLSCR3K7ERE1 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC13.04□□□□□ -0.32
TMEM256-PLSCR3K7ERE1 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
TMEM256-PLSCR3K7ERE1 EI24-211ENST00000534546 1544 ntTSL 2 BASIC13.04□□□□□ -0.32
TMEM256-PLSCR3K7ERE1 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC13.04□□□□□ -0.32
TMEM256-PLSCR3K7ERE1 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
TMEM256-PLSCR3K7ERE1 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
TMEM256-PLSCR3K7ERE1 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
TMEM256-PLSCR3K7ERE1 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
TMEM256-PLSCR3K7ERE1 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC13.04□□□□□ -0.32
TMEM256-PLSCR3K7ERE1 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC13.04□□□□□ -0.32
TMEM256-PLSCR3K7ERE1 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC13.04□□□□□ -0.32
TMEM256-PLSCR3K7ERE1 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
TMEM256-PLSCR3K7ERE1 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
TMEM256-PLSCR3K7ERE1 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC13.04□□□□□ -0.32
TMEM256-PLSCR3K7ERE1 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
TMEM256-PLSCR3K7ERE1 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC13.04□□□□□ -0.32
TMEM256-PLSCR3K7ERE1 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC13.04□□□□□ -0.32
TMEM256-PLSCR3K7ERE1 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
TMEM256-PLSCR3K7ERE1 HTR7P1-202ENST00000624664 4411 ntBASIC13.04□□□□□ -0.32
TMEM256-PLSCR3K7ERE1 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
TMEM256-PLSCR3K7ERE1 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
TMEM256-PLSCR3K7ERE1 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
TMEM256-PLSCR3K7ERE1 PALM-207ENST00000590161 2137 ntTSL 4 BASIC13.03□□□□□ -0.32
TMEM256-PLSCR3K7ERE1 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
TMEM256-PLSCR3K7ERE1 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC13.03□□□□□ -0.32
TMEM256-PLSCR3K7ERE1 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC13.03□□□□□ -0.32
TMEM256-PLSCR3K7ERE1 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC13.03□□□□□ -0.32
TMEM256-PLSCR3K7ERE1 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC13.03□□□□□ -0.32
TMEM256-PLSCR3K7ERE1 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC13.03□□□□□ -0.32
TMEM256-PLSCR3K7ERE1 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
TMEM256-PLSCR3K7ERE1 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
TMEM256-PLSCR3K7ERE1 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC13.03□□□□□ -0.32
TMEM256-PLSCR3K7ERE1 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC13.03□□□□□ -0.32
TMEM256-PLSCR3K7ERE1 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
TMEM256-PLSCR3K7ERE1 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms