Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 AC105233.4-201ENST00000642045 216 ntBASIC21.38■■□□□ 1.01
CCDC188H7C350 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
CCDC188H7C350 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
CCDC188H7C350 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CCDC188H7C350 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
CCDC188H7C350 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
CCDC188H7C350 SMG8-203ENST00000578922 2178 ntBASIC21.37■■□□□ 1.01
CCDC188H7C350 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC21.37■■□□□ 1.01
CCDC188H7C350 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CCDC188H7C350 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC21.37■■□□□ 1.01
CCDC188H7C350 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CCDC188H7C350 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC21.37■■□□□ 1.01
CCDC188H7C350 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
CCDC188H7C350 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC21.37■■□□□ 1.01
CCDC188H7C350 MFF-208ENST00000409616 1247 ntTSL 5 BASIC21.37■■□□□ 1.01
CCDC188H7C350 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC21.37■■□□□ 1.01
CCDC188H7C350 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC21.37■■□□□ 1.01
CCDC188H7C350 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC21.37■■□□□ 1.01
CCDC188H7C350 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC21.37■■□□□ 1.01
CCDC188H7C350 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
CCDC188H7C350 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CCDC188H7C350 AC061975.6-201ENST00000579045 1553 ntBASIC21.36■■□□□ 1.01
CCDC188H7C350 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CCDC188H7C350 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CCDC188H7C350 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CCDC188H7C350 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CCDC188H7C350 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC21.36■■□□□ 1.01
CCDC188H7C350 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
CCDC188H7C350 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
CCDC188H7C350 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
CCDC188H7C350 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CCDC188H7C350 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC21.36■■□□□ 1.01
CCDC188H7C350 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC21.36■■□□□ 1.01
CCDC188H7C350 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
CCDC188H7C350 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
CCDC188H7C350 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
CCDC188H7C350 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC21.35■■□□□ 1.01
CCDC188H7C350 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
CCDC188H7C350 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC21.35■■□□□ 1.01
CCDC188H7C350 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CCDC188H7C350 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
CCDC188H7C350 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC21.35■■□□□ 1.01
CCDC188H7C350 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
CCDC188H7C350 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
CCDC188H7C350 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC21.35■■□□□ 1.01
CCDC188H7C350 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC21.35■■□□□ 1.01
CCDC188H7C350 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
CCDC188H7C350 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CCDC188H7C350 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC21.35■■□□□ 1.01
CCDC188H7C350 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
CCDC188H7C350 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
CCDC188H7C350 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
CCDC188H7C350 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
CCDC188H7C350 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC21.34■■□□□ 1.01
CCDC188H7C350 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC21.34■■□□□ 1.01
CCDC188H7C350 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CCDC188H7C350 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CCDC188H7C350 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
CCDC188H7C350 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
CCDC188H7C350 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CCDC188H7C350 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
CCDC188H7C350 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CCDC188H7C350 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
CCDC188H7C350 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CCDC188H7C350 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CCDC188H7C350 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CCDC188H7C350 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1.01
CCDC188H7C350 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CCDC188H7C350 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CCDC188H7C350 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1.01
CCDC188H7C350 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CCDC188H7C350 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CCDC188H7C350 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
CCDC188H7C350 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1.01
CCDC188H7C350 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC21.33■■□□□ 1.01
CCDC188H7C350 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
CCDC188H7C350 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC21.33■■□□□ 1.01
CCDC188H7C350 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CCDC188H7C350 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CCDC188H7C350 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC21.33■■□□□ 1
CCDC188H7C350 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC21.33■■□□□ 1
CCDC188H7C350 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
CCDC188H7C350 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
CCDC188H7C350 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CCDC188H7C350 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
CCDC188H7C350 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC21.32■■□□□ 1
CCDC188H7C350 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC21.32■■□□□ 1
CCDC188H7C350 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC21.32■■□□□ 1
CCDC188H7C350 MPST-208ENST00000628507 698 ntTSL 5 BASIC21.32■■□□□ 1
CCDC188H7C350 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC21.32■■□□□ 1
CCDC188H7C350 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC21.32■■□□□ 1
CCDC188H7C350 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CCDC188H7C350 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC21.32■■□□□ 1
CCDC188H7C350 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC21.32■■□□□ 1
CCDC188H7C350 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC21.32■■□□□ 1
CCDC188H7C350 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC21.32■■□□□ 1
CCDC188H7C350 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC21.32■■□□□ 1
CCDC188H7C350 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC21.32■■□□□ 1
CCDC188H7C350 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC21.31■■□□□ 1
CCDC188H7C350 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC21.31■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms