Protein–RNA interactions for Protein: H3BM21

Integrin beta (Fragment), humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3BM21 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
H3BM21 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC20.48■□□□□ 0.87
H3BM21 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC20.48■□□□□ 0.87
H3BM21 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
H3BM21 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC20.48■□□□□ 0.87
H3BM21 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
H3BM21 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
H3BM21 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
H3BM21 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
H3BM21 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC20.47■□□□□ 0.87
H3BM21 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
H3BM21 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC20.47■□□□□ 0.87
H3BM21 DUSP5P2-201ENST00000426873 1033 ntBASIC20.47■□□□□ 0.87
H3BM21 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
H3BM21 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC20.47■□□□□ 0.87
H3BM21 AC091874.3-201ENST00000512672 1195 ntBASIC20.47■□□□□ 0.87
H3BM21 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC20.47■□□□□ 0.87
H3BM21 BET1L-207ENST00000529614 560 ntTSL 5 BASIC20.47■□□□□ 0.87
H3BM21 MYC-209ENST00000641252 345 ntBASIC20.47■□□□□ 0.87
H3BM21 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC20.47■□□□□ 0.87
H3BM21 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
H3BM21 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
H3BM21 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
H3BM21 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
H3BM21 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
H3BM21 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC20.47■□□□□ 0.87
H3BM21 PARN-205ENST00000539279 1557 ntTSL 2 BASIC20.46■□□□□ 0.87
H3BM21 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
H3BM21 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
H3BM21 AC026310.3-201ENST00000625186 2373 ntBASIC20.46■□□□□ 0.87
H3BM21 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
H3BM21 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
H3BM21 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC20.46■□□□□ 0.87
H3BM21 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
H3BM21 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC20.46■□□□□ 0.87
H3BM21 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
H3BM21 KRT18P29-201ENST00000397031 1267 ntBASIC20.46■□□□□ 0.87
H3BM21 AC091799.1-201ENST00000422823 811 ntBASIC20.46■□□□□ 0.87
H3BM21 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
H3BM21 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC20.46■□□□□ 0.87
H3BM21 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC20.46■□□□□ 0.87
H3BM21 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC20.46■□□□□ 0.87
H3BM21 AC083880.1-201ENST00000608266 535 ntBASIC20.46■□□□□ 0.87
H3BM21 ITM2C-210ENST00000620962 501 ntBASIC20.46■□□□□ 0.87
H3BM21 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
H3BM21 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
H3BM21 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC20.46■□□□□ 0.87
H3BM21 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
H3BM21 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
H3BM21 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC20.46■□□□□ 0.87
H3BM21 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
H3BM21 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
H3BM21 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
H3BM21 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC20.45■□□□□ 0.86
H3BM21 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC20.45■□□□□ 0.86
H3BM21 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
H3BM21 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
H3BM21 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
H3BM21 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
H3BM21 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC20.45■□□□□ 0.86
H3BM21 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC20.45■□□□□ 0.86
H3BM21 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC20.45■□□□□ 0.86
H3BM21 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
H3BM21 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC20.45■□□□□ 0.86
H3BM21 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
H3BM21 AL024507.2-201ENST00000606070 2574 ntBASIC20.44■□□□□ 0.86
H3BM21 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
H3BM21 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
H3BM21 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
H3BM21 PALM-207ENST00000590161 2137 ntTSL 4 BASIC20.44■□□□□ 0.86
H3BM21 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC20.44■□□□□ 0.86
H3BM21 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
H3BM21 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
H3BM21 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
H3BM21 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
H3BM21 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
H3BM21 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
H3BM21 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC20.44■□□□□ 0.86
H3BM21 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC20.44■□□□□ 0.86
H3BM21 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC20.44■□□□□ 0.86
H3BM21 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
H3BM21 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
H3BM21 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC20.44■□□□□ 0.86
H3BM21 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
H3BM21 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
H3BM21 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
H3BM21 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
H3BM21 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
H3BM21 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
H3BM21 FEM1AP4-201ENST00000443167 1987 ntBASIC20.43■□□□□ 0.86
H3BM21 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
H3BM21 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
H3BM21 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
H3BM21 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
H3BM21 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
H3BM21 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC20.43■□□□□ 0.86
H3BM21 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC20.43■□□□□ 0.86
H3BM21 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
H3BM21 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC20.43■□□□□ 0.86
H3BM21 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 52.5 ms