Protein–RNA interactions for Protein: E7ERA6

RNF223, RING finger protein 223, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF223E7ERA6 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RNF223E7ERA6 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RNF223E7ERA6 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC17.11■□□□□ 0.33
RNF223E7ERA6 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
RNF223E7ERA6 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RNF223E7ERA6 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RNF223E7ERA6 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC17.11■□□□□ 0.33
RNF223E7ERA6 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC17.11■□□□□ 0.33
RNF223E7ERA6 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC17.11■□□□□ 0.33
RNF223E7ERA6 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC17.11■□□□□ 0.33
RNF223E7ERA6 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RNF223E7ERA6 AC107982.2-201ENST00000577360 463 ntTSL 5 BASIC17.11■□□□□ 0.33
RNF223E7ERA6 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC17.11■□□□□ 0.33
RNF223E7ERA6 AC124016.1-201ENST00000609552 612 ntBASIC17.11■□□□□ 0.33
RNF223E7ERA6 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RNF223E7ERA6 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
RNF223E7ERA6 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RNF223E7ERA6 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RNF223E7ERA6 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RNF223E7ERA6 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
RNF223E7ERA6 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RNF223E7ERA6 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
RNF223E7ERA6 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RNF223E7ERA6 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RNF223E7ERA6 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RNF223E7ERA6 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RNF223E7ERA6 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC17.11■□□□□ 0.33
RNF223E7ERA6 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RNF223E7ERA6 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RNF223E7ERA6 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RNF223E7ERA6 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RNF223E7ERA6 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
RNF223E7ERA6 GGT1-206ENST00000404223 952 ntTSL 2 BASIC17.1■□□□□ 0.33
RNF223E7ERA6 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC17.1■□□□□ 0.33
RNF223E7ERA6 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RNF223E7ERA6 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RNF223E7ERA6 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
RNF223E7ERA6 MAX-217ENST00000557277 728 ntTSL 3 BASIC17.1■□□□□ 0.33
RNF223E7ERA6 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
RNF223E7ERA6 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
RNF223E7ERA6 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC17.1■□□□□ 0.33
RNF223E7ERA6 AP001412.1-201ENST00000608405 714 ntBASIC17.1■□□□□ 0.33
RNF223E7ERA6 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RNF223E7ERA6 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RNF223E7ERA6 AC133561.5-201ENST00000635547 218 ntBASIC17.1■□□□□ 0.33
RNF223E7ERA6 AL049637.2-201ENST00000641778 930 ntBASIC17.1■□□□□ 0.33
RNF223E7ERA6 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RNF223E7ERA6 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RNF223E7ERA6 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC17.1■□□□□ 0.33
RNF223E7ERA6 AC116050.2-201ENST00000612102 1779 ntBASIC17.1■□□□□ 0.33
RNF223E7ERA6 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RNF223E7ERA6 AC080038.3-201ENST00000623346 1952 ntBASIC17.09■□□□□ 0.33
RNF223E7ERA6 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RNF223E7ERA6 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RNF223E7ERA6 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
RNF223E7ERA6 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RNF223E7ERA6 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RNF223E7ERA6 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC17.09■□□□□ 0.33
RNF223E7ERA6 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
RNF223E7ERA6 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC17.09■□□□□ 0.33
RNF223E7ERA6 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RNF223E7ERA6 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RNF223E7ERA6 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
RNF223E7ERA6 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RNF223E7ERA6 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RNF223E7ERA6 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RNF223E7ERA6 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
RNF223E7ERA6 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RNF223E7ERA6 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
RNF223E7ERA6 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
RNF223E7ERA6 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC17.08■□□□□ 0.33
RNF223E7ERA6 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.33
RNF223E7ERA6 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC17.08■□□□□ 0.33
RNF223E7ERA6 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
RNF223E7ERA6 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC17.08■□□□□ 0.32
RNF223E7ERA6 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
RNF223E7ERA6 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
RNF223E7ERA6 KRASP1-201ENST00000407852 552 ntBASIC17.08■□□□□ 0.32
RNF223E7ERA6 SERF2-207ENST00000409614 582 ntTSL 2 BASIC17.08■□□□□ 0.32
RNF223E7ERA6 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC17.08■□□□□ 0.32
RNF223E7ERA6 AC098799.1-201ENST00000504752 800 ntBASIC17.08■□□□□ 0.32
RNF223E7ERA6 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.32
RNF223E7ERA6 DHDH-203ENST00000522614 776 ntTSL 5 BASIC17.08■□□□□ 0.32
RNF223E7ERA6 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC17.08■□□□□ 0.32
RNF223E7ERA6 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC17.08■□□□□ 0.32
RNF223E7ERA6 AC006557.6-201ENST00000623071 864 ntBASIC17.08■□□□□ 0.32
RNF223E7ERA6 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
RNF223E7ERA6 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
RNF223E7ERA6 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
RNF223E7ERA6 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC17.08■□□□□ 0.32
RNF223E7ERA6 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC17.08■□□□□ 0.32
RNF223E7ERA6 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
RNF223E7ERA6 AC012676.1-201ENST00000574705 1949 ntBASIC17.08■□□□□ 0.32
RNF223E7ERA6 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC17.07■□□□□ 0.32
RNF223E7ERA6 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RNF223E7ERA6 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
RNF223E7ERA6 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RNF223E7ERA6 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC17.07■□□□□ 0.32
RNF223E7ERA6 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC17.07■□□□□ 0.32
RNF223E7ERA6 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms