Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TCRBV4S1A1TA0A5B7 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TCRBV4S1A1TA0A5B7 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TCRBV4S1A1TA0A5B7 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC16.51■□□□□ 0.23
TCRBV4S1A1TA0A5B7 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TCRBV4S1A1TA0A5B7 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
TCRBV4S1A1TA0A5B7 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TCRBV4S1A1TA0A5B7 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC16.51■□□□□ 0.23
TCRBV4S1A1TA0A5B7 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TCRBV4S1A1TA0A5B7 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TCRBV4S1A1TA0A5B7 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC16.51■□□□□ 0.23
TCRBV4S1A1TA0A5B7 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TCRBV4S1A1TA0A5B7 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TCRBV4S1A1TA0A5B7 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC16.51■□□□□ 0.23
TCRBV4S1A1TA0A5B7 EEF1DP3-203ENST00000566025 782 ntBASIC16.51■□□□□ 0.23
TCRBV4S1A1TA0A5B7 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC16.51■□□□□ 0.23
TCRBV4S1A1TA0A5B7 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TCRBV4S1A1TA0A5B7 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC16.51■□□□□ 0.23
TCRBV4S1A1TA0A5B7 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TCRBV4S1A1TA0A5B7 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TCRBV4S1A1TA0A5B7 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TCRBV4S1A1TA0A5B7 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC16.5■□□□□ 0.23
TCRBV4S1A1TA0A5B7 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TCRBV4S1A1TA0A5B7 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TCRBV4S1A1TA0A5B7 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
TCRBV4S1A1TA0A5B7 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
TCRBV4S1A1TA0A5B7 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC16.5■□□□□ 0.23
TCRBV4S1A1TA0A5B7 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC16.5■□□□□ 0.23
TCRBV4S1A1TA0A5B7 BMP1-204ENST00000397814 836 ntTSL 4 BASIC16.5■□□□□ 0.23
TCRBV4S1A1TA0A5B7 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC16.5■□□□□ 0.23
TCRBV4S1A1TA0A5B7 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC16.5■□□□□ 0.23
TCRBV4S1A1TA0A5B7 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TCRBV4S1A1TA0A5B7 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC16.5■□□□□ 0.23
TCRBV4S1A1TA0A5B7 AC008175.2-201ENST00000612840 297 ntBASIC16.5■□□□□ 0.23
TCRBV4S1A1TA0A5B7 TFG-210ENST00000620299 1289 ntTSL 5 BASIC16.5■□□□□ 0.23
TCRBV4S1A1TA0A5B7 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TCRBV4S1A1TA0A5B7 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TCRBV4S1A1TA0A5B7 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC16.5■□□□□ 0.23
TCRBV4S1A1TA0A5B7 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TCRBV4S1A1TA0A5B7 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TCRBV4S1A1TA0A5B7 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TCRBV4S1A1TA0A5B7 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TCRBV4S1A1TA0A5B7 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TCRBV4S1A1TA0A5B7 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC16.5■□□□□ 0.23
TCRBV4S1A1TA0A5B7 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
TCRBV4S1A1TA0A5B7 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TCRBV4S1A1TA0A5B7 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC16.49■□□□□ 0.23
TCRBV4S1A1TA0A5B7 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC16.49■□□□□ 0.23
TCRBV4S1A1TA0A5B7 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC16.49■□□□□ 0.23
TCRBV4S1A1TA0A5B7 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC16.49■□□□□ 0.23
TCRBV4S1A1TA0A5B7 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TCRBV4S1A1TA0A5B7 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TCRBV4S1A1TA0A5B7 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC16.49■□□□□ 0.23
TCRBV4S1A1TA0A5B7 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC16.49■□□□□ 0.23
TCRBV4S1A1TA0A5B7 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
TCRBV4S1A1TA0A5B7 DENND3-207ENST00000518347 850 ntTSL 2 BASIC16.49■□□□□ 0.23
TCRBV4S1A1TA0A5B7 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC16.49■□□□□ 0.23
TCRBV4S1A1TA0A5B7 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
TCRBV4S1A1TA0A5B7 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC16.49■□□□□ 0.23
TCRBV4S1A1TA0A5B7 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TCRBV4S1A1TA0A5B7 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TCRBV4S1A1TA0A5B7 AL121832.2-201ENST00000610979 668 ntBASIC16.49■□□□□ 0.23
TCRBV4S1A1TA0A5B7 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TCRBV4S1A1TA0A5B7 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TCRBV4S1A1TA0A5B7 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
TCRBV4S1A1TA0A5B7 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TCRBV4S1A1TA0A5B7 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC16.49■□□□□ 0.23
TCRBV4S1A1TA0A5B7 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC16.49■□□□□ 0.23
TCRBV4S1A1TA0A5B7 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC16.48■□□□□ 0.23
TCRBV4S1A1TA0A5B7 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TCRBV4S1A1TA0A5B7 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
TCRBV4S1A1TA0A5B7 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC16.48■□□□□ 0.23
TCRBV4S1A1TA0A5B7 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TCRBV4S1A1TA0A5B7 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC16.48■□□□□ 0.23
TCRBV4S1A1TA0A5B7 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TCRBV4S1A1TA0A5B7 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TCRBV4S1A1TA0A5B7 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TCRBV4S1A1TA0A5B7 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TCRBV4S1A1TA0A5B7 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC16.48■□□□□ 0.23
TCRBV4S1A1TA0A5B7 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC16.48■□□□□ 0.23
TCRBV4S1A1TA0A5B7 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC16.48■□□□□ 0.23
TCRBV4S1A1TA0A5B7 AC010536.3-201ENST00000620306 533 ntBASIC16.48■□□□□ 0.23
TCRBV4S1A1TA0A5B7 PARP1-210ENST00000629232 477 ntTSL 5 BASIC16.48■□□□□ 0.23
TCRBV4S1A1TA0A5B7 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
TCRBV4S1A1TA0A5B7 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC16.48■□□□□ 0.23
TCRBV4S1A1TA0A5B7 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TCRBV4S1A1TA0A5B7 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC16.48■□□□□ 0.23
TCRBV4S1A1TA0A5B7 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TCRBV4S1A1TA0A5B7 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC16.48■□□□□ 0.23
TCRBV4S1A1TA0A5B7 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC16.48■□□□□ 0.23
TCRBV4S1A1TA0A5B7 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
TCRBV4S1A1TA0A5B7 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TCRBV4S1A1TA0A5B7 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TCRBV4S1A1TA0A5B7 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC16.48■□□□□ 0.23
TCRBV4S1A1TA0A5B7 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TCRBV4S1A1TA0A5B7 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC16.47■□□□□ 0.23
TCRBV4S1A1TA0A5B7 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TCRBV4S1A1TA0A5B7 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TCRBV4S1A1TA0A5B7 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC16.47■□□□□ 0.23
TCRBV4S1A1TA0A5B7 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms