Protein–RNA interactions for Protein: A0A576

TCRBV9S1A1T, T-cell receptor beta variable 3-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV9S1A1TA0A576 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC20.72■□□□□ 0.91
TCRBV9S1A1TA0A576 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
TCRBV9S1A1TA0A576 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TCRBV9S1A1TA0A576 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
TCRBV9S1A1TA0A576 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC20.72■□□□□ 0.91
TCRBV9S1A1TA0A576 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TCRBV9S1A1TA0A576 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TCRBV9S1A1TA0A576 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
TCRBV9S1A1TA0A576 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
TCRBV9S1A1TA0A576 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC20.72■□□□□ 0.91
TCRBV9S1A1TA0A576 AC008175.2-201ENST00000612840 297 ntBASIC20.72■□□□□ 0.91
TCRBV9S1A1TA0A576 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC20.72■□□□□ 0.91
TCRBV9S1A1TA0A576 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC20.72■□□□□ 0.91
TCRBV9S1A1TA0A576 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
TCRBV9S1A1TA0A576 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TCRBV9S1A1TA0A576 BID-204ENST00000399767 2129 ntTSL 2 BASIC20.72■□□□□ 0.91
TCRBV9S1A1TA0A576 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
TCRBV9S1A1TA0A576 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
TCRBV9S1A1TA0A576 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TCRBV9S1A1TA0A576 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC20.72■□□□□ 0.91
TCRBV9S1A1TA0A576 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
TCRBV9S1A1TA0A576 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
TCRBV9S1A1TA0A576 AC007952.6-201ENST00000573168 2673 ntBASIC20.71■□□□□ 0.91
TCRBV9S1A1TA0A576 AC003957.1-201ENST00000625108 2673 ntBASIC20.71■□□□□ 0.91
TCRBV9S1A1TA0A576 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
TCRBV9S1A1TA0A576 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC20.71■□□□□ 0.91
TCRBV9S1A1TA0A576 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
TCRBV9S1A1TA0A576 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC20.71■□□□□ 0.91
TCRBV9S1A1TA0A576 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC20.71■□□□□ 0.91
TCRBV9S1A1TA0A576 KRT87P-202ENST00000534226 1464 ntBASIC20.71■□□□□ 0.91
TCRBV9S1A1TA0A576 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TCRBV9S1A1TA0A576 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC20.71■□□□□ 0.91
TCRBV9S1A1TA0A576 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
TCRBV9S1A1TA0A576 MTURN-203ENST00000409688 843 ntTSL 2 BASIC20.71■□□□□ 0.91
TCRBV9S1A1TA0A576 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
TCRBV9S1A1TA0A576 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
TCRBV9S1A1TA0A576 SUDS3P1-201ENST00000505831 966 ntBASIC20.71■□□□□ 0.91
TCRBV9S1A1TA0A576 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC20.71■□□□□ 0.91
TCRBV9S1A1TA0A576 RARRES2P11-201ENST00000635158 484 ntBASIC20.71■□□□□ 0.91
TCRBV9S1A1TA0A576 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
TCRBV9S1A1TA0A576 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TCRBV9S1A1TA0A576 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
TCRBV9S1A1TA0A576 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
TCRBV9S1A1TA0A576 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC20.7■□□□□ 0.91
TCRBV9S1A1TA0A576 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC20.7■□□□□ 0.91
TCRBV9S1A1TA0A576 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TCRBV9S1A1TA0A576 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC20.7■□□□□ 0.9
TCRBV9S1A1TA0A576 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TCRBV9S1A1TA0A576 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
TCRBV9S1A1TA0A576 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
TCRBV9S1A1TA0A576 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC20.7■□□□□ 0.9
TCRBV9S1A1TA0A576 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
TCRBV9S1A1TA0A576 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
TCRBV9S1A1TA0A576 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC20.69■□□□□ 0.9
TCRBV9S1A1TA0A576 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC20.69■□□□□ 0.9
TCRBV9S1A1TA0A576 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC20.69■□□□□ 0.9
TCRBV9S1A1TA0A576 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TCRBV9S1A1TA0A576 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
TCRBV9S1A1TA0A576 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TCRBV9S1A1TA0A576 AC079140.4-201ENST00000507448 529 ntBASIC20.69■□□□□ 0.9
TCRBV9S1A1TA0A576 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC20.69■□□□□ 0.9
TCRBV9S1A1TA0A576 AL358852.1-201ENST00000623174 1268 ntBASIC20.69■□□□□ 0.9
TCRBV9S1A1TA0A576 AC092720.2-201ENST00000602388 1665 ntBASIC20.69■□□□□ 0.9
TCRBV9S1A1TA0A576 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
TCRBV9S1A1TA0A576 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
TCRBV9S1A1TA0A576 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC20.68■□□□□ 0.9
TCRBV9S1A1TA0A576 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TCRBV9S1A1TA0A576 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC20.68■□□□□ 0.9
TCRBV9S1A1TA0A576 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC20.68■□□□□ 0.9
TCRBV9S1A1TA0A576 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
TCRBV9S1A1TA0A576 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
TCRBV9S1A1TA0A576 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TCRBV9S1A1TA0A576 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
TCRBV9S1A1TA0A576 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC20.68■□□□□ 0.9
TCRBV9S1A1TA0A576 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC20.68■□□□□ 0.9
TCRBV9S1A1TA0A576 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC20.68■□□□□ 0.9
TCRBV9S1A1TA0A576 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
TCRBV9S1A1TA0A576 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
TCRBV9S1A1TA0A576 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC20.68■□□□□ 0.9
TCRBV9S1A1TA0A576 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC20.67■□□□□ 0.9
TCRBV9S1A1TA0A576 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TCRBV9S1A1TA0A576 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC20.67■□□□□ 0.9
TCRBV9S1A1TA0A576 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TCRBV9S1A1TA0A576 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
TCRBV9S1A1TA0A576 MIR6084-201ENST00000622012 110 ntBASIC20.67■□□□□ 0.9
TCRBV9S1A1TA0A576 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
TCRBV9S1A1TA0A576 KRT16P2-201ENST00000414673 1423 ntBASIC20.67■□□□□ 0.9
TCRBV9S1A1TA0A576 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TCRBV9S1A1TA0A576 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
TCRBV9S1A1TA0A576 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TCRBV9S1A1TA0A576 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TCRBV9S1A1TA0A576 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
TCRBV9S1A1TA0A576 NALT1-201ENST00000429224 738 ntTSL 5 BASIC20.66■□□□□ 0.9
TCRBV9S1A1TA0A576 SERP1-208ENST00000491660 830 ntTSL 2 BASIC20.66■□□□□ 0.9
TCRBV9S1A1TA0A576 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC20.66■□□□□ 0.9
TCRBV9S1A1TA0A576 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC20.66■□□□□ 0.9
TCRBV9S1A1TA0A576 AC138907.5-202ENST00000569484 235 ntBASIC20.66■□□□□ 0.9
TCRBV9S1A1TA0A576 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TCRBV9S1A1TA0A576 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
TCRBV9S1A1TA0A576 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC20.66■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 127.3 ms