Protein–RNA interactions for Protein: A0A0K0K1C4

TRBV27, T-cell receptor beta variable 27 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV27A0A0K0K1C4 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC14.53□□□□□ -0.08
TRBV27A0A0K0K1C4 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRBV27A0A0K0K1C4 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRBV27A0A0K0K1C4 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRBV27A0A0K0K1C4 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC14.53□□□□□ -0.08
TRBV27A0A0K0K1C4 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
TRBV27A0A0K0K1C4 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC14.53□□□□□ -0.08
TRBV27A0A0K0K1C4 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
TRBV27A0A0K0K1C4 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRBV27A0A0K0K1C4 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
TRBV27A0A0K0K1C4 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRBV27A0A0K0K1C4 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
TRBV27A0A0K0K1C4 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
TRBV27A0A0K0K1C4 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
TRBV27A0A0K0K1C4 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRBV27A0A0K0K1C4 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.08
TRBV27A0A0K0K1C4 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
TRBV27A0A0K0K1C4 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
TRBV27A0A0K0K1C4 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
TRBV27A0A0K0K1C4 AP004607.4-201ENST00000530158 1459 ntBASIC14.52□□□□□ -0.08
TRBV27A0A0K0K1C4 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
TRBV27A0A0K0K1C4 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
TRBV27A0A0K0K1C4 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
TRBV27A0A0K0K1C4 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
TRBV27A0A0K0K1C4 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
TRBV27A0A0K0K1C4 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC14.52□□□□□ -0.09
TRBV27A0A0K0K1C4 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TRBV27A0A0K0K1C4 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TRBV27A0A0K0K1C4 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
TRBV27A0A0K0K1C4 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
TRBV27A0A0K0K1C4 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
TRBV27A0A0K0K1C4 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC14.52□□□□□ -0.09
TRBV27A0A0K0K1C4 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC14.52□□□□□ -0.09
TRBV27A0A0K0K1C4 AC018445.3-201ENST00000624177 1945 ntBASIC14.52□□□□□ -0.09
TRBV27A0A0K0K1C4 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TRBV27A0A0K0K1C4 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TRBV27A0A0K0K1C4 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TRBV27A0A0K0K1C4 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
TRBV27A0A0K0K1C4 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
TRBV27A0A0K0K1C4 AC005224.4-201ENST00000583262 1652 ntBASIC14.52□□□□□ -0.09
TRBV27A0A0K0K1C4 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
TRBV27A0A0K0K1C4 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC14.51□□□□□ -0.09
TRBV27A0A0K0K1C4 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC14.51□□□□□ -0.09
TRBV27A0A0K0K1C4 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC14.51□□□□□ -0.09
TRBV27A0A0K0K1C4 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC14.51□□□□□ -0.09
TRBV27A0A0K0K1C4 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRBV27A0A0K0K1C4 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRBV27A0A0K0K1C4 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
TRBV27A0A0K0K1C4 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC14.51□□□□□ -0.09
TRBV27A0A0K0K1C4 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC14.51□□□□□ -0.09
TRBV27A0A0K0K1C4 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
TRBV27A0A0K0K1C4 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRBV27A0A0K0K1C4 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRBV27A0A0K0K1C4 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRBV27A0A0K0K1C4 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRBV27A0A0K0K1C4 BX842568.3-201ENST00000418104 571 ntBASIC14.51□□□□□ -0.09
TRBV27A0A0K0K1C4 GRAMD4P7-201ENST00000578182 1232 ntBASIC14.51□□□□□ -0.09
TRBV27A0A0K0K1C4 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC14.51□□□□□ -0.09
TRBV27A0A0K0K1C4 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRBV27A0A0K0K1C4 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC14.51□□□□□ -0.09
TRBV27A0A0K0K1C4 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRBV27A0A0K0K1C4 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRBV27A0A0K0K1C4 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRBV27A0A0K0K1C4 AC087289.5-201ENST00000586076 3175 ntBASIC14.5□□□□□ -0.09
TRBV27A0A0K0K1C4 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
TRBV27A0A0K0K1C4 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC14.5□□□□□ -0.09
TRBV27A0A0K0K1C4 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC14.5□□□□□ -0.09
TRBV27A0A0K0K1C4 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC14.5□□□□□ -0.09
TRBV27A0A0K0K1C4 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
TRBV27A0A0K0K1C4 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TRBV27A0A0K0K1C4 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
TRBV27A0A0K0K1C4 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
TRBV27A0A0K0K1C4 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC14.5□□□□□ -0.09
TRBV27A0A0K0K1C4 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
TRBV27A0A0K0K1C4 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC14.5□□□□□ -0.09
TRBV27A0A0K0K1C4 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
TRBV27A0A0K0K1C4 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC14.5□□□□□ -0.09
TRBV27A0A0K0K1C4 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
TRBV27A0A0K0K1C4 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TRBV27A0A0K0K1C4 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC14.5□□□□□ -0.09
TRBV27A0A0K0K1C4 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TRBV27A0A0K0K1C4 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TRBV27A0A0K0K1C4 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TRBV27A0A0K0K1C4 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TRBV27A0A0K0K1C4 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC14.5□□□□□ -0.09
TRBV27A0A0K0K1C4 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TRBV27A0A0K0K1C4 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
TRBV27A0A0K0K1C4 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
TRBV27A0A0K0K1C4 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC14.5□□□□□ -0.09
TRBV27A0A0K0K1C4 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TRBV27A0A0K0K1C4 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC14.5□□□□□ -0.09
TRBV27A0A0K0K1C4 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
TRBV27A0A0K0K1C4 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC14.49□□□□□ -0.09
TRBV27A0A0K0K1C4 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
TRBV27A0A0K0K1C4 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC14.49□□□□□ -0.09
TRBV27A0A0K0K1C4 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC14.49□□□□□ -0.09
TRBV27A0A0K0K1C4 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC14.49□□□□□ -0.09
TRBV27A0A0K0K1C4 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
TRBV27A0A0K0K1C4 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
TRBV27A0A0K0K1C4 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms