Protein–RNA interactions for Protein: A0A0J9YWB2

TRBV7-9, T-cell receptor beta variable 7-9 (Fragment), humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV7-9A0A0J9YWB2 AF213884.3-201ENST00000563833 479 ntBASIC15.34■□□□□ 0.05
TRBV7-9A0A0J9YWB2 MAG-206ENST00000597035 542 ntTSL 4 BASIC15.34■□□□□ 0.05
TRBV7-9A0A0J9YWB2 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
TRBV7-9A0A0J9YWB2 AC020907.5-201ENST00000624372 1936 ntBASIC15.34■□□□□ 0.05
TRBV7-9A0A0J9YWB2 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRBV7-9A0A0J9YWB2 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
TRBV7-9A0A0J9YWB2 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRBV7-9A0A0J9YWB2 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
TRBV7-9A0A0J9YWB2 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRBV7-9A0A0J9YWB2 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
TRBV7-9A0A0J9YWB2 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
TRBV7-9A0A0J9YWB2 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRBV7-9A0A0J9YWB2 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
TRBV7-9A0A0J9YWB2 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
TRBV7-9A0A0J9YWB2 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.05
TRBV7-9A0A0J9YWB2 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
TRBV7-9A0A0J9YWB2 AC092667.1-201ENST00000434301 2586 ntBASIC15.33■□□□□ 0.05
TRBV7-9A0A0J9YWB2 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.05
TRBV7-9A0A0J9YWB2 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
TRBV7-9A0A0J9YWB2 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
TRBV7-9A0A0J9YWB2 HCG11-201ENST00000411553 5696 ntBASIC15.33■□□□□ 0.05
TRBV7-9A0A0J9YWB2 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
TRBV7-9A0A0J9YWB2 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
TRBV7-9A0A0J9YWB2 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC15.33■□□□□ 0.04
TRBV7-9A0A0J9YWB2 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRBV7-9A0A0J9YWB2 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC15.33■□□□□ 0.04
TRBV7-9A0A0J9YWB2 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC15.33■□□□□ 0.04
TRBV7-9A0A0J9YWB2 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC15.33■□□□□ 0.04
TRBV7-9A0A0J9YWB2 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC15.33■□□□□ 0.04
TRBV7-9A0A0J9YWB2 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRBV7-9A0A0J9YWB2 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC15.33■□□□□ 0.04
TRBV7-9A0A0J9YWB2 AL136967.2-201ENST00000623968 743 ntBASIC15.33■□□□□ 0.04
TRBV7-9A0A0J9YWB2 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRBV7-9A0A0J9YWB2 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC15.33■□□□□ 0.04
TRBV7-9A0A0J9YWB2 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
TRBV7-9A0A0J9YWB2 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
TRBV7-9A0A0J9YWB2 AC073314.1-201ENST00000568729 2216 ntBASIC15.33■□□□□ 0.04
TRBV7-9A0A0J9YWB2 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRBV7-9A0A0J9YWB2 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRBV7-9A0A0J9YWB2 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRBV7-9A0A0J9YWB2 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
TRBV7-9A0A0J9YWB2 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRBV7-9A0A0J9YWB2 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC15.33■□□□□ 0.04
TRBV7-9A0A0J9YWB2 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC15.33■□□□□ 0.04
TRBV7-9A0A0J9YWB2 BID-203ENST00000399765 1879 ntTSL 2 BASIC15.33■□□□□ 0.04
TRBV7-9A0A0J9YWB2 KRT16P2-201ENST00000414673 1423 ntBASIC15.33■□□□□ 0.04
TRBV7-9A0A0J9YWB2 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
TRBV7-9A0A0J9YWB2 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC15.33■□□□□ 0.04
TRBV7-9A0A0J9YWB2 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
TRBV7-9A0A0J9YWB2 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC15.32■□□□□ 0.04
TRBV7-9A0A0J9YWB2 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRBV7-9A0A0J9YWB2 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRBV7-9A0A0J9YWB2 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
TRBV7-9A0A0J9YWB2 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC15.32■□□□□ 0.04
TRBV7-9A0A0J9YWB2 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRBV7-9A0A0J9YWB2 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
TRBV7-9A0A0J9YWB2 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRBV7-9A0A0J9YWB2 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC15.32■□□□□ 0.04
TRBV7-9A0A0J9YWB2 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRBV7-9A0A0J9YWB2 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRBV7-9A0A0J9YWB2 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC15.32■□□□□ 0.04
TRBV7-9A0A0J9YWB2 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TRBV7-9A0A0J9YWB2 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC15.32■□□□□ 0.04
TRBV7-9A0A0J9YWB2 AC120498.10-201ENST00000621827 505 ntBASIC15.32■□□□□ 0.04
TRBV7-9A0A0J9YWB2 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
TRBV7-9A0A0J9YWB2 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRBV7-9A0A0J9YWB2 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TRBV7-9A0A0J9YWB2 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC15.32■□□□□ 0.04
TRBV7-9A0A0J9YWB2 AIRN-201ENST00000601203 4374 ntBASIC15.32■□□□□ 0.04
TRBV7-9A0A0J9YWB2 KRT87P-202ENST00000534226 1464 ntBASIC15.32■□□□□ 0.04
TRBV7-9A0A0J9YWB2 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
TRBV7-9A0A0J9YWB2 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
TRBV7-9A0A0J9YWB2 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TRBV7-9A0A0J9YWB2 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TRBV7-9A0A0J9YWB2 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC15.32■□□□□ 0.04
TRBV7-9A0A0J9YWB2 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TRBV7-9A0A0J9YWB2 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC15.31■□□□□ 0.04
TRBV7-9A0A0J9YWB2 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRBV7-9A0A0J9YWB2 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRBV7-9A0A0J9YWB2 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC15.31■□□□□ 0.04
TRBV7-9A0A0J9YWB2 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRBV7-9A0A0J9YWB2 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC15.31■□□□□ 0.04
TRBV7-9A0A0J9YWB2 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TRBV7-9A0A0J9YWB2 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRBV7-9A0A0J9YWB2 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TRBV7-9A0A0J9YWB2 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC15.31■□□□□ 0.04
TRBV7-9A0A0J9YWB2 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC15.31■□□□□ 0.04
TRBV7-9A0A0J9YWB2 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC15.31■□□□□ 0.04
TRBV7-9A0A0J9YWB2 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TRBV7-9A0A0J9YWB2 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRBV7-9A0A0J9YWB2 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRBV7-9A0A0J9YWB2 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRBV7-9A0A0J9YWB2 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRBV7-9A0A0J9YWB2 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC15.31■□□□□ 0.04
TRBV7-9A0A0J9YWB2 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TRBV7-9A0A0J9YWB2 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRBV7-9A0A0J9YWB2 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
TRBV7-9A0A0J9YWB2 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TRBV7-9A0A0J9YWB2 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
TRBV7-9A0A0J9YWB2 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms