Protein–RNA interactions for Protein: A0A0B4J276

TRAV25, T-cell receptor alpha variable 25 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV25A0A0B4J276 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
TRAV25A0A0B4J276 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC15.48■□□□□ 0.07
TRAV25A0A0B4J276 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC15.48■□□□□ 0.07
TRAV25A0A0B4J276 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
TRAV25A0A0B4J276 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRAV25A0A0B4J276 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRAV25A0A0B4J276 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRAV25A0A0B4J276 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC15.48■□□□□ 0.07
TRAV25A0A0B4J276 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
TRAV25A0A0B4J276 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC15.48■□□□□ 0.07
TRAV25A0A0B4J276 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC15.48■□□□□ 0.07
TRAV25A0A0B4J276 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRAV25A0A0B4J276 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
TRAV25A0A0B4J276 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TRAV25A0A0B4J276 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
TRAV25A0A0B4J276 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC15.47■□□□□ 0.07
TRAV25A0A0B4J276 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC15.47■□□□□ 0.07
TRAV25A0A0B4J276 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
TRAV25A0A0B4J276 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
TRAV25A0A0B4J276 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TRAV25A0A0B4J276 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
TRAV25A0A0B4J276 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TRAV25A0A0B4J276 ID1-201ENST00000376105 1233 ntBASIC15.47■□□□□ 0.07
TRAV25A0A0B4J276 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
TRAV25A0A0B4J276 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
TRAV25A0A0B4J276 MCRIP2P1-201ENST00000394346 511 ntBASIC15.47■□□□□ 0.07
TRAV25A0A0B4J276 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
TRAV25A0A0B4J276 METTL15-202ENST00000403099 795 ntTSL 5 BASIC15.47■□□□□ 0.07
TRAV25A0A0B4J276 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
TRAV25A0A0B4J276 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC15.47■□□□□ 0.07
TRAV25A0A0B4J276 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC15.47■□□□□ 0.07
TRAV25A0A0B4J276 GXYLT1P5-201ENST00000614548 1189 ntBASIC15.47■□□□□ 0.07
TRAV25A0A0B4J276 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
TRAV25A0A0B4J276 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC15.47■□□□□ 0.07
TRAV25A0A0B4J276 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TRAV25A0A0B4J276 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TRAV25A0A0B4J276 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TRAV25A0A0B4J276 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
TRAV25A0A0B4J276 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC15.46■□□□□ 0.07
TRAV25A0A0B4J276 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC15.46■□□□□ 0.07
TRAV25A0A0B4J276 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TRAV25A0A0B4J276 AC121338.2-201ENST00000622535 1744 ntBASIC15.46■□□□□ 0.07
TRAV25A0A0B4J276 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TRAV25A0A0B4J276 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
TRAV25A0A0B4J276 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TRAV25A0A0B4J276 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
TRAV25A0A0B4J276 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC15.46■□□□□ 0.07
TRAV25A0A0B4J276 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TRAV25A0A0B4J276 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC15.46■□□□□ 0.07
TRAV25A0A0B4J276 MAP2K4P1-201ENST00000438453 1195 ntBASIC15.46■□□□□ 0.07
TRAV25A0A0B4J276 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC15.46■□□□□ 0.07
TRAV25A0A0B4J276 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC15.46■□□□□ 0.07
TRAV25A0A0B4J276 AL109923.1-201ENST00000618799 583 ntBASIC15.46■□□□□ 0.07
TRAV25A0A0B4J276 MKRN4P-201ENST00000444706 1521 ntBASIC15.46■□□□□ 0.07
TRAV25A0A0B4J276 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
TRAV25A0A0B4J276 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC15.46■□□□□ 0.07
TRAV25A0A0B4J276 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TRAV25A0A0B4J276 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC15.46■□□□□ 0.07
TRAV25A0A0B4J276 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC15.46■□□□□ 0.06
TRAV25A0A0B4J276 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC15.46■□□□□ 0.06
TRAV25A0A0B4J276 AL121603.2-201ENST00000557373 2117 ntBASIC15.46■□□□□ 0.06
TRAV25A0A0B4J276 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC15.46■□□□□ 0.06
TRAV25A0A0B4J276 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC15.45■□□□□ 0.06
TRAV25A0A0B4J276 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRAV25A0A0B4J276 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC15.45■□□□□ 0.06
TRAV25A0A0B4J276 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC15.45■□□□□ 0.06
TRAV25A0A0B4J276 AC010980.2-201ENST00000587099 1412 ntBASIC15.45■□□□□ 0.06
TRAV25A0A0B4J276 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRAV25A0A0B4J276 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRAV25A0A0B4J276 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC15.45■□□□□ 0.06
TRAV25A0A0B4J276 TSPY6P-201ENST00000448518 926 ntBASIC15.45■□□□□ 0.06
TRAV25A0A0B4J276 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC15.45■□□□□ 0.06
TRAV25A0A0B4J276 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC15.45■□□□□ 0.06
TRAV25A0A0B4J276 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
TRAV25A0A0B4J276 ISCU-212ENST00000547005 795 ntTSL 3 BASIC15.45■□□□□ 0.06
TRAV25A0A0B4J276 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC15.45■□□□□ 0.06
TRAV25A0A0B4J276 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
TRAV25A0A0B4J276 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC15.45■□□□□ 0.06
TRAV25A0A0B4J276 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC15.45■□□□□ 0.06
TRAV25A0A0B4J276 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRAV25A0A0B4J276 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRAV25A0A0B4J276 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC15.45■□□□□ 0.06
TRAV25A0A0B4J276 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRAV25A0A0B4J276 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRAV25A0A0B4J276 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
TRAV25A0A0B4J276 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRAV25A0A0B4J276 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
TRAV25A0A0B4J276 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRAV25A0A0B4J276 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC15.45■□□□□ 0.06
TRAV25A0A0B4J276 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRAV25A0A0B4J276 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
TRAV25A0A0B4J276 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC15.44■□□□□ 0.06
TRAV25A0A0B4J276 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC15.44■□□□□ 0.06
TRAV25A0A0B4J276 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRAV25A0A0B4J276 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
TRAV25A0A0B4J276 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
TRAV25A0A0B4J276 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRAV25A0A0B4J276 WT1-AS_3.1-201ENST00000613262 234 ntBASIC15.44■□□□□ 0.06
TRAV25A0A0B4J276 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC15.44■□□□□ 0.06
TRAV25A0A0B4J276 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms