Protein–RNA interactions for Protein: A0A0B4J275

TRAV17, T-cell receptor alpha variable 17 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV17A0A0B4J275 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC18.69■□□□□ 0.58
TRAV17A0A0B4J275 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC18.69■□□□□ 0.58
TRAV17A0A0B4J275 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRAV17A0A0B4J275 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC18.69■□□□□ 0.58
TRAV17A0A0B4J275 ME2-206ENST00000638410 2289 ntTSL 5 BASIC18.69■□□□□ 0.58
TRAV17A0A0B4J275 ME2-210ENST00000639255 2262 ntTSL 5 BASIC18.69■□□□□ 0.58
TRAV17A0A0B4J275 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRAV17A0A0B4J275 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC18.69■□□□□ 0.58
TRAV17A0A0B4J275 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC18.69■□□□□ 0.58
TRAV17A0A0B4J275 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
TRAV17A0A0B4J275 POM121L13P-201ENST00000422362 380 ntBASIC18.69■□□□□ 0.58
TRAV17A0A0B4J275 AL596275.1-201ENST00000423464 877 ntBASIC18.69■□□□□ 0.58
TRAV17A0A0B4J275 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TRAV17A0A0B4J275 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC18.69■□□□□ 0.58
TRAV17A0A0B4J275 BRWD1-AS2-201ENST00000603064 1028 ntBASIC18.69■□□□□ 0.58
TRAV17A0A0B4J275 AC069544.1-201ENST00000609399 999 ntBASIC18.69■□□□□ 0.58
TRAV17A0A0B4J275 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TRAV17A0A0B4J275 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRAV17A0A0B4J275 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRAV17A0A0B4J275 TERT-206ENST00000508104 2486 ntTSL 5 BASIC18.68■□□□□ 0.58
TRAV17A0A0B4J275 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRAV17A0A0B4J275 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC18.68■□□□□ 0.58
TRAV17A0A0B4J275 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRAV17A0A0B4J275 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRAV17A0A0B4J275 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
TRAV17A0A0B4J275 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRAV17A0A0B4J275 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
TRAV17A0A0B4J275 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC18.68■□□□□ 0.58
TRAV17A0A0B4J275 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRAV17A0A0B4J275 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC18.68■□□□□ 0.58
TRAV17A0A0B4J275 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC18.68■□□□□ 0.58
TRAV17A0A0B4J275 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC18.68■□□□□ 0.58
TRAV17A0A0B4J275 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC18.68■□□□□ 0.58
TRAV17A0A0B4J275 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRAV17A0A0B4J275 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TRAV17A0A0B4J275 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRAV17A0A0B4J275 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TRAV17A0A0B4J275 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC18.68■□□□□ 0.58
TRAV17A0A0B4J275 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC18.67■□□□□ 0.58
TRAV17A0A0B4J275 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC18.67■□□□□ 0.58
TRAV17A0A0B4J275 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC18.67■□□□□ 0.58
TRAV17A0A0B4J275 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRAV17A0A0B4J275 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRAV17A0A0B4J275 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC18.67■□□□□ 0.58
TRAV17A0A0B4J275 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC18.67■□□□□ 0.58
TRAV17A0A0B4J275 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TRAV17A0A0B4J275 AC233723.2-201ENST00000623798 2106 ntBASIC18.67■□□□□ 0.58
TRAV17A0A0B4J275 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC18.67■□□□□ 0.58
TRAV17A0A0B4J275 GGT1-206ENST00000404223 952 ntTSL 2 BASIC18.67■□□□□ 0.58
TRAV17A0A0B4J275 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TRAV17A0A0B4J275 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC18.67■□□□□ 0.58
TRAV17A0A0B4J275 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TRAV17A0A0B4J275 ARL16-209ENST00000573715 763 ntTSL 3 BASIC18.67■□□□□ 0.58
TRAV17A0A0B4J275 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC18.67■□□□□ 0.58
TRAV17A0A0B4J275 ARL16-211ENST00000576135 694 ntTSL 3 BASIC18.67■□□□□ 0.58
TRAV17A0A0B4J275 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRAV17A0A0B4J275 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRAV17A0A0B4J275 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TRAV17A0A0B4J275 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRAV17A0A0B4J275 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRAV17A0A0B4J275 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRAV17A0A0B4J275 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC18.67■□□□□ 0.58
TRAV17A0A0B4J275 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRAV17A0A0B4J275 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRAV17A0A0B4J275 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRAV17A0A0B4J275 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC18.66■□□□□ 0.58
TRAV17A0A0B4J275 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC18.66■□□□□ 0.58
TRAV17A0A0B4J275 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRAV17A0A0B4J275 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TRAV17A0A0B4J275 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
TRAV17A0A0B4J275 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRAV17A0A0B4J275 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
TRAV17A0A0B4J275 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRAV17A0A0B4J275 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC18.66■□□□□ 0.58
TRAV17A0A0B4J275 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
TRAV17A0A0B4J275 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRAV17A0A0B4J275 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRAV17A0A0B4J275 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TRAV17A0A0B4J275 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TRAV17A0A0B4J275 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRAV17A0A0B4J275 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TRAV17A0A0B4J275 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRAV17A0A0B4J275 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRAV17A0A0B4J275 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC18.65■□□□□ 0.58
TRAV17A0A0B4J275 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TRAV17A0A0B4J275 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC18.65■□□□□ 0.58
TRAV17A0A0B4J275 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC18.65■□□□□ 0.58
TRAV17A0A0B4J275 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRAV17A0A0B4J275 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRAV17A0A0B4J275 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
TRAV17A0A0B4J275 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC18.65■□□□□ 0.58
TRAV17A0A0B4J275 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
TRAV17A0A0B4J275 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRAV17A0A0B4J275 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC18.65■□□□□ 0.58
TRAV17A0A0B4J275 AL356652.1-201ENST00000615962 565 ntBASIC18.65■□□□□ 0.58
TRAV17A0A0B4J275 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TRAV17A0A0B4J275 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
TRAV17A0A0B4J275 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TRAV17A0A0B4J275 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRAV17A0A0B4J275 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 16.2 ms