Protein–RNA interactions for Protein: A0A0B4J1X8

IGHV3-43, Immunoglobulin heavy variable 3-43, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-43A0A0B4J1X8 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC17.06■□□□□ 0.32
IGHV3-43A0A0B4J1X8 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
IGHV3-43A0A0B4J1X8 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
IGHV3-43A0A0B4J1X8 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
IGHV3-43A0A0B4J1X8 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
IGHV3-43A0A0B4J1X8 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC17.06■□□□□ 0.32
IGHV3-43A0A0B4J1X8 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
IGHV3-43A0A0B4J1X8 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
IGHV3-43A0A0B4J1X8 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
IGHV3-43A0A0B4J1X8 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC17.06■□□□□ 0.32
IGHV3-43A0A0B4J1X8 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
IGHV3-43A0A0B4J1X8 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
IGHV3-43A0A0B4J1X8 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC17.06■□□□□ 0.32
IGHV3-43A0A0B4J1X8 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
IGHV3-43A0A0B4J1X8 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
IGHV3-43A0A0B4J1X8 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
IGHV3-43A0A0B4J1X8 AC073314.1-201ENST00000568729 2216 ntBASIC17.05■□□□□ 0.32
IGHV3-43A0A0B4J1X8 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC17.05■□□□□ 0.32
IGHV3-43A0A0B4J1X8 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
IGHV3-43A0A0B4J1X8 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
IGHV3-43A0A0B4J1X8 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
IGHV3-43A0A0B4J1X8 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
IGHV3-43A0A0B4J1X8 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
IGHV3-43A0A0B4J1X8 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC17.05■□□□□ 0.32
IGHV3-43A0A0B4J1X8 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
IGHV3-43A0A0B4J1X8 AC245052.3-201ENST00000450182 901 ntBASIC17.05■□□□□ 0.32
IGHV3-43A0A0B4J1X8 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
IGHV3-43A0A0B4J1X8 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC17.05■□□□□ 0.32
IGHV3-43A0A0B4J1X8 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC17.05■□□□□ 0.32
IGHV3-43A0A0B4J1X8 RARRES2P11-201ENST00000635158 484 ntBASIC17.05■□□□□ 0.32
IGHV3-43A0A0B4J1X8 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC17.05■□□□□ 0.32
IGHV3-43A0A0B4J1X8 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
IGHV3-43A0A0B4J1X8 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
IGHV3-43A0A0B4J1X8 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC17.05■□□□□ 0.32
IGHV3-43A0A0B4J1X8 LINC01521-201ENST00000504184 1943 ntBASIC17.05■□□□□ 0.32
IGHV3-43A0A0B4J1X8 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
IGHV3-43A0A0B4J1X8 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
IGHV3-43A0A0B4J1X8 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC17.05■□□□□ 0.32
IGHV3-43A0A0B4J1X8 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
IGHV3-43A0A0B4J1X8 KRT16P2-201ENST00000414673 1423 ntBASIC17.04■□□□□ 0.32
IGHV3-43A0A0B4J1X8 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
IGHV3-43A0A0B4J1X8 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
IGHV3-43A0A0B4J1X8 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC17.04■□□□□ 0.32
IGHV3-43A0A0B4J1X8 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
IGHV3-43A0A0B4J1X8 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
IGHV3-43A0A0B4J1X8 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
IGHV3-43A0A0B4J1X8 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
IGHV3-43A0A0B4J1X8 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
IGHV3-43A0A0B4J1X8 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
IGHV3-43A0A0B4J1X8 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
IGHV3-43A0A0B4J1X8 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
IGHV3-43A0A0B4J1X8 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC17.04■□□□□ 0.32
IGHV3-43A0A0B4J1X8 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
IGHV3-43A0A0B4J1X8 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
IGHV3-43A0A0B4J1X8 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
IGHV3-43A0A0B4J1X8 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
IGHV3-43A0A0B4J1X8 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
IGHV3-43A0A0B4J1X8 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC17.04■□□□□ 0.32
IGHV3-43A0A0B4J1X8 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC17.04■□□□□ 0.32
IGHV3-43A0A0B4J1X8 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC17.04■□□□□ 0.32
IGHV3-43A0A0B4J1X8 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC17.04■□□□□ 0.32
IGHV3-43A0A0B4J1X8 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC17.04■□□□□ 0.32
IGHV3-43A0A0B4J1X8 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
IGHV3-43A0A0B4J1X8 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
IGHV3-43A0A0B4J1X8 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC17.04■□□□□ 0.32
IGHV3-43A0A0B4J1X8 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
IGHV3-43A0A0B4J1X8 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
IGHV3-43A0A0B4J1X8 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
IGHV3-43A0A0B4J1X8 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
IGHV3-43A0A0B4J1X8 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
IGHV3-43A0A0B4J1X8 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC17.03■□□□□ 0.32
IGHV3-43A0A0B4J1X8 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
IGHV3-43A0A0B4J1X8 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
IGHV3-43A0A0B4J1X8 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
IGHV3-43A0A0B4J1X8 AC007225.1-201ENST00000566331 1836 ntBASIC17.03■□□□□ 0.32
IGHV3-43A0A0B4J1X8 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
IGHV3-43A0A0B4J1X8 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC17.03■□□□□ 0.32
IGHV3-43A0A0B4J1X8 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
IGHV3-43A0A0B4J1X8 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
IGHV3-43A0A0B4J1X8 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC17.03■□□□□ 0.32
IGHV3-43A0A0B4J1X8 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
IGHV3-43A0A0B4J1X8 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC17.03■□□□□ 0.32
IGHV3-43A0A0B4J1X8 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
IGHV3-43A0A0B4J1X8 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC17.03■□□□□ 0.32
IGHV3-43A0A0B4J1X8 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
IGHV3-43A0A0B4J1X8 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
IGHV3-43A0A0B4J1X8 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
IGHV3-43A0A0B4J1X8 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC17.03■□□□□ 0.32
IGHV3-43A0A0B4J1X8 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
IGHV3-43A0A0B4J1X8 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
IGHV3-43A0A0B4J1X8 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC17.03■□□□□ 0.32
IGHV3-43A0A0B4J1X8 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
IGHV3-43A0A0B4J1X8 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
IGHV3-43A0A0B4J1X8 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
IGHV3-43A0A0B4J1X8 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
IGHV3-43A0A0B4J1X8 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
IGHV3-43A0A0B4J1X8 AC011484.1-201ENST00000377652 1995 ntBASIC17.02■□□□□ 0.32
IGHV3-43A0A0B4J1X8 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
IGHV3-43A0A0B4J1X8 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
IGHV3-43A0A0B4J1X8 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC17.02■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 54.3 ms