Protein–RNA interactions for Protein: A0A087WT03

TRAV26-1, T-cell receptor alpha variable 26-1 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV26-1A0A087WT03 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRAV26-1A0A087WT03 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRAV26-1A0A087WT03 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRAV26-1A0A087WT03 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRAV26-1A0A087WT03 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRAV26-1A0A087WT03 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRAV26-1A0A087WT03 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRAV26-1A0A087WT03 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC14.81□□□□□ -0.04
TRAV26-1A0A087WT03 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRAV26-1A0A087WT03 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
TRAV26-1A0A087WT03 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRAV26-1A0A087WT03 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC14.81□□□□□ -0.04
TRAV26-1A0A087WT03 AC016769.1-201ENST00000409132 1010 ntBASIC14.81□□□□□ -0.04
TRAV26-1A0A087WT03 RNF146-206ENST00000480444 843 ntTSL 2 BASIC14.81□□□□□ -0.04
TRAV26-1A0A087WT03 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC14.81□□□□□ -0.04
TRAV26-1A0A087WT03 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC14.81□□□□□ -0.04
TRAV26-1A0A087WT03 AP001160.3-201ENST00000601484 763 ntBASIC14.81□□□□□ -0.04
TRAV26-1A0A087WT03 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRAV26-1A0A087WT03 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRAV26-1A0A087WT03 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC14.81□□□□□ -0.04
TRAV26-1A0A087WT03 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRAV26-1A0A087WT03 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRAV26-1A0A087WT03 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
TRAV26-1A0A087WT03 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
TRAV26-1A0A087WT03 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC14.8□□□□□ -0.04
TRAV26-1A0A087WT03 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
TRAV26-1A0A087WT03 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
TRAV26-1A0A087WT03 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRAV26-1A0A087WT03 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
TRAV26-1A0A087WT03 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRAV26-1A0A087WT03 DBI-210ENST00000542275 757 ntTSL 5 BASIC14.8□□□□□ -0.04
TRAV26-1A0A087WT03 AC138907.5-202ENST00000569484 235 ntBASIC14.8□□□□□ -0.04
TRAV26-1A0A087WT03 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC14.8□□□□□ -0.04
TRAV26-1A0A087WT03 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC14.8□□□□□ -0.04
TRAV26-1A0A087WT03 AC022517.1-201ENST00000592429 346 ntBASIC14.8□□□□□ -0.04
TRAV26-1A0A087WT03 AC008175.2-201ENST00000612840 297 ntBASIC14.8□□□□□ -0.04
TRAV26-1A0A087WT03 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRAV26-1A0A087WT03 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
TRAV26-1A0A087WT03 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRAV26-1A0A087WT03 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRAV26-1A0A087WT03 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC14.8□□□□□ -0.04
TRAV26-1A0A087WT03 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRAV26-1A0A087WT03 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRAV26-1A0A087WT03 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRAV26-1A0A087WT03 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRAV26-1A0A087WT03 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
TRAV26-1A0A087WT03 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
TRAV26-1A0A087WT03 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC14.8□□□□□ -0.04
TRAV26-1A0A087WT03 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRAV26-1A0A087WT03 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC14.8□□□□□ -0.04
TRAV26-1A0A087WT03 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRAV26-1A0A087WT03 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC14.79□□□□□ -0.04
TRAV26-1A0A087WT03 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRAV26-1A0A087WT03 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRAV26-1A0A087WT03 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRAV26-1A0A087WT03 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRAV26-1A0A087WT03 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRAV26-1A0A087WT03 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
TRAV26-1A0A087WT03 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRAV26-1A0A087WT03 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
TRAV26-1A0A087WT03 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
TRAV26-1A0A087WT03 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRAV26-1A0A087WT03 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TRAV26-1A0A087WT03 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
TRAV26-1A0A087WT03 AC010141.2-201ENST00000452426 721 ntBASIC14.79□□□□□ -0.04
TRAV26-1A0A087WT03 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC14.79□□□□□ -0.04
TRAV26-1A0A087WT03 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC14.79□□□□□ -0.04
TRAV26-1A0A087WT03 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
TRAV26-1A0A087WT03 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC14.79□□□□□ -0.04
TRAV26-1A0A087WT03 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
TRAV26-1A0A087WT03 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC14.79□□□□□ -0.04
TRAV26-1A0A087WT03 AC092666.2-201ENST00000613287 246 ntBASIC14.79□□□□□ -0.04
TRAV26-1A0A087WT03 AC120498.10-201ENST00000621827 505 ntBASIC14.79□□□□□ -0.04
TRAV26-1A0A087WT03 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC14.78□□□□□ -0.04
TRAV26-1A0A087WT03 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRAV26-1A0A087WT03 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
TRAV26-1A0A087WT03 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC14.78□□□□□ -0.04
TRAV26-1A0A087WT03 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
TRAV26-1A0A087WT03 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRAV26-1A0A087WT03 STX7-201ENST00000367937 1090 ntTSL 5 BASIC14.78□□□□□ -0.04
TRAV26-1A0A087WT03 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC14.78□□□□□ -0.04
TRAV26-1A0A087WT03 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC14.78□□□□□ -0.04
TRAV26-1A0A087WT03 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC14.78□□□□□ -0.04
TRAV26-1A0A087WT03 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC14.78□□□□□ -0.04
TRAV26-1A0A087WT03 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC14.78□□□□□ -0.04
TRAV26-1A0A087WT03 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRAV26-1A0A087WT03 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC14.78□□□□□ -0.04
TRAV26-1A0A087WT03 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
TRAV26-1A0A087WT03 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRAV26-1A0A087WT03 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRAV26-1A0A087WT03 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC14.78□□□□□ -0.04
TRAV26-1A0A087WT03 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRAV26-1A0A087WT03 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
TRAV26-1A0A087WT03 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC14.77□□□□□ -0.04
TRAV26-1A0A087WT03 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
TRAV26-1A0A087WT03 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC14.77□□□□□ -0.04
TRAV26-1A0A087WT03 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
TRAV26-1A0A087WT03 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC14.77□□□□□ -0.04
TRAV26-1A0A087WT03 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
TRAV26-1A0A087WT03 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms