Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 SLC24A1-201ENST00000261892 5768 ntAPPRIS P3 TSL 1 (best) BASIC9.87□□□□□ -0.83
MTHFRP42898 ZNF30-201ENST00000303586 2579 ntAPPRIS P4 TSL 1 (best) BASIC9.87□□□□□ -0.83
MTHFRP42898 KANK1-206ENST00000382303 5581 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
MTHFRP42898 CIT-201ENST00000261833 8578 ntAPPRIS P3 TSL 1 (best) BASIC9.87□□□□□ -0.83
MTHFRP42898 NFYC-203ENST00000372652 2363 ntTSL 2 BASIC9.87□□□□□ -0.83
MTHFRP42898 LINC01484-203ENST00000521128 2361 ntTSL 2 BASIC9.87□□□□□ -0.83
MTHFRP42898 TRAPPC2-201ENST00000359680 2716 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
MTHFRP42898 AC110048.2-201ENST00000617013 6721 ntBASIC9.87□□□□□ -0.83
MTHFRP42898 FNBP1L-201ENST00000260506 5341 ntAPPRIS ALT1 TSL 1 (best) BASIC9.87□□□□□ -0.83
MTHFRP42898 FANCM-202ENST00000542564 6167 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
MTHFRP42898 GPR50-201ENST00000218316 1951 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
MTHFRP42898 LRRC74A-202ENST00000393774 1648 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
MTHFRP42898 SPEN-201ENST00000375759 12232 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
MTHFRP42898 TMED6-201ENST00000288025 938 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
MTHFRP42898 VPS53-203ENST00000401468 1269 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
MTHFRP42898 SEM1-204ENST00000417009 350 ntTSL 3 BASIC9.87□□□□□ -0.83
MTHFRP42898 AC097382.1-201ENST00000441093 591 ntTSL 5 BASIC9.87□□□□□ -0.83
MTHFRP42898 PMS2P10-201ENST00000447708 612 ntBASIC9.87□□□□□ -0.83
MTHFRP42898 AL109933.1-201ENST00000448126 292 ntTSL 5 BASIC9.87□□□□□ -0.83
MTHFRP42898 AL356310.1-201ENST00000452024 585 ntTSL 3 BASIC9.87□□□□□ -0.83
MTHFRP42898 NDUFB11P1-201ENST00000455818 465 ntBASIC9.87□□□□□ -0.83
MTHFRP42898 RN7SL359P-201ENST00000473502 288 ntBASIC9.87□□□□□ -0.83
MTHFRP42898 RN7SL461P-201ENST00000484915 282 ntBASIC9.87□□□□□ -0.83
MTHFRP42898 ZNF252P-203ENST00000527222 876 ntTSL 2 BASIC9.87□□□□□ -0.83
MTHFRP42898 AP003170.1-201ENST00000536944 1030 ntBASIC9.87□□□□□ -0.83
MTHFRP42898 COX7B2-204ENST00000543208 587 ntAPPRIS ALT1 TSL 5 BASIC9.87□□□□□ -0.83
MTHFRP42898 IZUMO3-202ENST00000543880 1229 ntAPPRIS ALT2 TSL 5 BASIC9.87□□□□□ -0.83
MTHFRP42898 UBE2N-206ENST00000552442 607 ntTSL 5 BASIC9.87□□□□□ -0.83
MTHFRP42898 LINC02321-201ENST00000555975 384 ntTSL 3 BASIC9.87□□□□□ -0.83
MTHFRP42898 AC012414.3-201ENST00000559621 748 ntTSL 5 BASIC9.87□□□□□ -0.83
MTHFRP42898 AC011767.1-203ENST00000559762 529 ntTSL 5 BASIC9.87□□□□□ -0.83
MTHFRP42898 FTLP14-201ENST00000562087 484 ntBASIC9.87□□□□□ -0.83
MTHFRP42898 UBBP4-201ENST00000583708 689 ntBASIC9.87□□□□□ -0.83
MTHFRP42898 AC008991.1-201ENST00000591285 537 ntTSL 4 BASIC9.87□□□□□ -0.83
MTHFRP42898 AC015911.8-201ENST00000592517 560 ntBASIC9.87□□□□□ -0.83
MTHFRP42898 CUTA-214ENST00000607266 661 ntAPPRIS P3 TSL 1 (best) BASIC9.87□□□□□ -0.83
MTHFRP42898 PPARGC1A-218ENST00000617484 1026 ntTSL 5 BASIC9.87□□□□□ -0.83
MTHFRP42898 MIR7113-201ENST00000621222 59 ntBASIC9.87□□□□□ -0.83
MTHFRP42898 PPP1R12B-218ENST00000634903 878 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
MTHFRP42898 RASGEF1B-213ENST00000613784 3485 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
MTHFRP42898 ZNF571-AS1-201ENST00000585578 2777 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
MTHFRP42898 TNS1-209ENST00000446688 4292 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
MTHFRP42898 ITGB1BP2-205ENST00000538820 1439 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
MTHFRP42898 NLRP1-216ENST00000617618 4788 ntAPPRIS P4 TSL 5 BASIC9.87□□□□□ -0.83
MTHFRP42898 NELL1-211ENST00000532434 2400 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
MTHFRP42898 E2F3-202ENST00000535432 4425 ntAPPRIS ALT2 TSL 1 (best) BASIC9.87□□□□□ -0.83
MTHFRP42898 PCSK1-201ENST00000311106 5086 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
MTHFRP42898 CPEB1-207ENST00000611031 3074 ntAPPRIS ALT1 TSL 5 BASIC9.87□□□□□ -0.83
MTHFRP42898 FOXO3-203ENST00000540898 2553 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
MTHFRP42898 TRPM3-207ENST00000377101 2075 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
MTHFRP42898 AGXT2-204ENST00000510428 1561 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
MTHFRP42898 MYOM1-202ENST00000356443 5847 ntAPPRIS P4 TSL 1 (best) BASIC9.87□□□□□ -0.83
MTHFRP42898 DIAPH1-211ENST00000518047 4668 ntAPPRIS ALT2 TSL 5 BASIC9.87□□□□□ -0.83
MTHFRP42898 STX16-203ENST00000358029 4329 ntAPPRIS ALT1 TSL 1 (best) BASIC9.87□□□□□ -0.83
MTHFRP42898 ATP6AP1L-201ENST00000380167 2503 ntAPPRIS P1 TSL 2 BASIC9.87□□□□□ -0.83
MTHFRP42898 GPR55-202ENST00000392040 3828 ntAPPRIS P1 TSL 5 BASIC9.87□□□□□ -0.83
MTHFRP42898 AL035696.1-201ENST00000381078 2007 ntTSL 2 BASIC9.87□□□□□ -0.83
MTHFRP42898 ADGRF1-202ENST00000371243 1370 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
MTHFRP42898 LINC01498-201ENST00000502160 2984 ntTSL 5 BASIC9.87□□□□□ -0.83
MTHFRP42898 SPECC1-201ENST00000261503 3948 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
MTHFRP42898 BCDIN3D-201ENST00000333924 3253 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
MTHFRP42898 ARHGEF11-202ENST00000368194 6889 ntAPPRIS P4 TSL 1 (best) BASIC9.86□□□□□ -0.83
MTHFRP42898 BX005214.3-201ENST00000615174 1988 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
MTHFRP42898 AL353770.3-201ENST00000616253 1988 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
MTHFRP42898 MYH13-202ENST00000418404 6067 ntAPPRIS P1 TSL 5 BASIC9.86□□□□□ -0.83
MTHFRP42898 FAM13A-220ENST00000513837 2590 ntTSL 2 BASIC9.86□□□□□ -0.83
MTHFRP42898 COL17A1-203ENST00000393211 1610 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
MTHFRP42898 SEPT4-206ENST00000457347 1795 ntAPPRIS ALT2 TSL 2 BASIC9.86□□□□□ -0.83
MTHFRP42898 GABPA-201ENST00000354828 5120 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
MTHFRP42898 BUB1-201ENST00000302759 3507 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
MTHFRP42898 TRHR-201ENST00000311762 1415 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
MTHFRP42898 IL36G-202ENST00000376489 989 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
MTHFRP42898 OR11A1-202ENST00000377148 2482 ntAPPRIS P1 BASIC9.86□□□□□ -0.83
MTHFRP42898 KRTAP9-9-201ENST00000394008 981 ntAPPRIS P1 BASIC9.86□□□□□ -0.83
MTHFRP42898 ZNF418-201ENST00000396147 3694 ntAPPRIS P3 TSL 1 (best) BASIC9.86□□□□□ -0.83
MTHFRP42898 FAM3B-202ENST00000398646 1026 ntTSL 5 BASIC9.86□□□□□ -0.83
MTHFRP42898 SCIMP-201ENST00000399600 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC9.86□□□□□ -0.83
MTHFRP42898 FAM96AP2-201ENST00000414727 477 ntBASIC9.86□□□□□ -0.83
MTHFRP42898 AL589935.1-204ENST00000423255 407 ntTSL 3 BASIC9.86□□□□□ -0.83
MTHFRP42898 TRMT112P4-201ENST00000429016 379 ntBASIC9.86□□□□□ -0.83
MTHFRP42898 SRGAP3-AS3-201ENST00000432981 1223 ntTSL 2 BASIC9.86□□□□□ -0.83
MTHFRP42898 OR6L1P-201ENST00000441446 910 ntBASIC9.86□□□□□ -0.83
MTHFRP42898 LINC01985-201ENST00000450746 436 ntTSL 3 BASIC9.86□□□□□ -0.83
MTHFRP42898 AC092042.1-201ENST00000457115 509 ntTSL 3 BASIC9.86□□□□□ -0.83
MTHFRP42898 AL096701.3-202ENST00000483736 615 ntTSL 2 BASIC9.86□□□□□ -0.83
MTHFRP42898 RN7SL845P-201ENST00000484385 290 ntBASIC9.86□□□□□ -0.83
MTHFRP42898 ENO1P3-201ENST00000484903 1224 ntBASIC9.86□□□□□ -0.83
MTHFRP42898 AC093162.2-201ENST00000501107 704 ntBASIC9.86□□□□□ -0.83
MTHFRP42898 HTR4-204ENST00000517929 1201 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
MTHFRP42898 AC025524.2-201ENST00000520862 536 ntTSL 4 BASIC9.86□□□□□ -0.83
MTHFRP42898 AC120042.1-201ENST00000524309 550 ntTSL 5 BASIC9.86□□□□□ -0.83
MTHFRP42898 CDK2AP1-206ENST00000544658 931 ntTSL 2 BASIC9.86□□□□□ -0.83
MTHFRP42898 AC034102.4-201ENST00000548595 434 ntTSL 5 BASIC9.86□□□□□ -0.83
MTHFRP42898 AC079907.2-201ENST00000550307 1034 ntTSL 3 BASIC9.86□□□□□ -0.83
MTHFRP42898 AC113146.1-201ENST00000558255 696 ntTSL 3 BASIC9.86□□□□□ -0.83
MTHFRP42898 PMM2-213ENST00000566983 907 ntTSL 5 BASIC9.86□□□□□ -0.83
MTHFRP42898 AC067796.1-201ENST00000586795 496 ntBASIC9.86□□□□□ -0.83
MTHFRP42898 AC008622.1-201ENST00000597106 284 ntBASIC9.86□□□□□ -0.83
MTHFRP42898 DMKN-268ENST00000602781 827 ntAPPRIS ALT2 TSL 3 BASIC9.86□□□□□ -0.83
MTHFRP42898 AC012464.3-201ENST00000604017 2773 ntBASIC9.86□□□□□ -0.83
Retrieved 100 of 98,524 protein–RNA pairs in 81.7 ms