Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 PBLD-207ENST00000495025 1349 ntTSL 5 BASIC8.56□□□□□ -1.04
P04436 AC027369.1-202ENST00000534734 1330 ntBASIC8.56□□□□□ -1.04
P04436 NPR3-202ENST00000326958 6380 ntTSL 2 BASIC8.56□□□□□ -1.04
P04436 MEIS2-211ENST00000559085 2538 ntTSL 2 BASIC8.56□□□□□ -1.04
P04436 DLGAP1-AS2-201ENST00000572856 2261 ntTSL 2 BASIC8.56□□□□□ -1.04
P04436 ANKRD46-206ENST00000520552 1686 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
P04436 RBM7-209ENST00000624815 3587 ntTSL 3 BASIC8.56□□□□□ -1.04
P04436 GPR82-201ENST00000302548 3349 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
P04436 PGAM1P8-202ENST00000534819 2354 ntBASIC8.56□□□□□ -1.04
P04436 MYO1H-201ENST00000310903 4364 ntTSL 5 BASIC8.56□□□□□ -1.04
P04436 RBM12B-202ENST00000517700 6001 ntAPPRIS ALT2 TSL 1 (best) BASIC8.56□□□□□ -1.04
P04436 CDH26-203ENST00000350849 2494 ntTSL 2 BASIC8.56□□□□□ -1.04
P04436 AC007608.1-201ENST00000379963 2469 ntTSL 2 BASIC8.56□□□□□ -1.04
P04436 GMDS-AS1-202ENST00000505870 8217 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
P04436 NIP7-202ENST00000254941 1887 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
P04436 TRIM16-201ENST00000336708 2900 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
P04436 FAM161B-201ENST00000286544 4078 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
P04436 HIST1H3E-202ENST00000634733 2679 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
P04436 FLJ40194-201ENST00000322227 2317 ntTSL 2 BASIC8.56□□□□□ -1.04
P04436 TRIM55-201ENST00000276573 1960 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
P04436 CRX-207ENST00000613299 4193 ntTSL 3 BASIC8.56□□□□□ -1.04
P04436 APOBEC1-201ENST00000229304 879 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
P04436 CLDN20-201ENST00000367165 1209 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
P04436 VTA1-201ENST00000367621 1284 ntTSL 5 BASIC8.56□□□□□ -1.04
P04436 HIST1H1PS1-201ENST00000404269 574 ntBASIC8.56□□□□□ -1.04
P04436 HLA-T-206ENST00000429813 450 ntBASIC8.56□□□□□ -1.04
P04436 AL355990.2-201ENST00000440688 508 ntTSL 3 BASIC8.56□□□□□ -1.04
P04436 POLR3KP1-201ENST00000449146 342 ntBASIC8.56□□□□□ -1.04
P04436 VDAC1P4-201ENST00000450197 835 ntBASIC8.56□□□□□ -1.04
P04436 HNRNPCP10-201ENST00000457130 884 ntBASIC8.56□□□□□ -1.04
P04436 RN7SL50P-201ENST00000461146 298 ntBASIC8.56□□□□□ -1.04
P04436 AL451124.1-201ENST00000478520 1026 ntBASIC8.56□□□□□ -1.04
P04436 RN7SL535P-201ENST00000479087 296 ntBASIC8.56□□□□□ -1.04
P04436 AC048341.1-201ENST00000480482 403 ntBASIC8.56□□□□□ -1.04
P04436 AC110768.2-201ENST00000506540 329 ntBASIC8.56□□□□□ -1.04
P04436 GJA1P1-201ENST00000511478 1143 ntBASIC8.56□□□□□ -1.04
P04436 AC209005.1-201ENST00000514043 464 ntTSL 3 BASIC8.56□□□□□ -1.04
P04436 RNU1-125P-201ENST00000516752 129 ntBASIC8.56□□□□□ -1.04
P04436 AC025437.4-201ENST00000522975 681 ntTSL 3 BASIC8.56□□□□□ -1.04
P04436 RPS13-202ENST00000525634 646 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
P04436 AMN1-207ENST00000536761 1025 ntTSL 2 BASIC8.56□□□□□ -1.04
P04436 AMN1-212ENST00000542781 879 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
P04436 NACA-204ENST00000546392 802 ntAPPRIS P1 TSL 2 BASIC8.56□□□□□ -1.04
P04436 AC117372.1-201ENST00000548633 620 ntBASIC8.56□□□□□ -1.04
P04436 AL110292.1-201ENST00000550024 477 ntTSL 3 BASIC8.56□□□□□ -1.04
P04436 AF001548.2-201ENST00000574212 836 ntTSL 2 BASIC8.56□□□□□ -1.04
P04436 AC024619.3-201ENST00000582196 323 ntTSL 2 BASIC8.56□□□□□ -1.04
P04436 ZNF350-AS1-201ENST00000595010 698 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
P04436 AC243960.1-201ENST00000595649 661 ntTSL 5 BASIC8.56□□□□□ -1.04
P04436 AL137798.1-201ENST00000607700 339 ntBASIC8.56□□□□□ -1.04
P04436 Metazoa_SRP.169-201ENST00000613708 283 ntBASIC8.56□□□□□ -1.04
P04436 AC018554.3-201ENST00000614215 1026 ntAPPRIS P1 BASIC8.56□□□□□ -1.04
P04436 AL354751.3-201ENST00000618526 1027 ntBASIC8.56□□□□□ -1.04
P04436 BCAS3-233ENST00000626960 227 ntTSL 5 BASIC8.56□□□□□ -1.04
P04436 AC008026.3-201ENST00000583426 1707 ntTSL 2 BASIC8.56□□□□□ -1.04
P04436 ITGB6-203ENST00000409872 2501 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
P04436 ZBTB40-201ENST00000374651 8368 ntAPPRIS ALT2 TSL 1 (best) BASIC8.56□□□□□ -1.04
P04436 CDH11-202ENST00000394156 6874 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
P04436 DNAJC16-203ENST00000375849 3446 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
P04436 ZP2-203ENST00000574002 2749 ntAPPRIS P3 TSL 1 (best) BASIC8.56□□□□□ -1.04
P04436 EZH1-205ENST00000585893 2394 ntTSL 2 BASIC8.56□□□□□ -1.04
P04436 EZH1-217ENST00000590078 2392 ntTSL 2 BASIC8.56□□□□□ -1.04
P04436 NR2C1-202ENST00000333003 4143 ntAPPRIS P1 TSL 2 BASIC8.56□□□□□ -1.04
P04436 MYH2-201ENST00000245503 6339 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
P04436 DNAH11-202ENST00000409508 14167 ntAPPRIS P2 TSL 5 BASIC8.55□□□□□ -1.04
P04436 TIMP2-202ENST00000536189 3415 ntTSL 2 BASIC8.55□□□□□ -1.04
P04436 ZBTB37-202ENST00000367702 1337 ntTSL 5 BASIC8.55□□□□□ -1.04
P04436 LINC01992-201ENST00000567574 1340 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
P04436 MROH5-201ENST00000430863 4164 ntAPPRIS P5 TSL 1 (best) BASIC8.55□□□□□ -1.04
P04436 ZBTB40-202ENST00000375647 8685 ntAPPRIS P3 TSL 1 (best) BASIC8.55□□□□□ -1.04
P04436 RASGEF1B-213ENST00000613784 3485 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
P04436 LRRC74A-202ENST00000393774 1648 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
P04436 TCF4-209ENST00000544241 2264 ntTSL 2 BASIC8.55□□□□□ -1.04
P04436 OR1D2-203ENST00000641833 4887 ntAPPRIS P1 BASIC8.55□□□□□ -1.04
P04436 CYP4A22-201ENST00000294337 1725 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
P04436 SLC12A1-203ENST00000396577 4708 ntAPPRIS ALT1 TSL 5 BASIC8.55□□□□□ -1.04
P04436 ZNF200-204ENST00000414144 3306 ntAPPRIS P3 TSL 1 (best) BASIC8.55□□□□□ -1.04
P04436 CNOT9-202ENST00000295701 1126 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
P04436 SNORA7.3-201ENST00000384186 139 ntBASIC8.55□□□□□ -1.04
P04436 BPI-202ENST00000417318 1082 ntTSL 5 BASIC8.55□□□□□ -1.04
P04436 AL139246.1-201ENST00000424657 455 ntTSL 3 BASIC8.55□□□□□ -1.04
P04436 AC092620.1-201ENST00000453636 680 ntTSL 3 BASIC8.55□□□□□ -1.04
P04436 LHFPL3-AS2-201ENST00000453666 923 ntTSL 3 BASIC8.55□□□□□ -1.04
P04436 RN7SL724P-201ENST00000461895 271 ntBASIC8.55□□□□□ -1.04
P04436 RBBP4P2-201ENST00000478252 1264 ntBASIC8.55□□□□□ -1.04
P04436 FXYD6P3-201ENST00000495569 285 ntBASIC8.55□□□□□ -1.04
P04436 AC091805.1-201ENST00000498395 342 ntBASIC8.55□□□□□ -1.04
P04436 RAB5CP2-201ENST00000505368 637 ntBASIC8.55□□□□□ -1.04
P04436 AC146949.1-201ENST00000505946 423 ntBASIC8.55□□□□□ -1.04
P04436 AC146944.1-201ENST00000508439 418 ntBASIC8.55□□□□□ -1.04
P04436 AP000867.1-201ENST00000511464 255 ntBASIC8.55□□□□□ -1.04
P04436 APOBEC3B-AS1-201ENST00000513758 691 ntTSL 3 BASIC8.55□□□□□ -1.04
P04436 AC099509.2-201ENST00000513926 406 ntTSL 3 BASIC8.55□□□□□ -1.04
P04436 CSNK1A1-206ENST00000515748 620 ntTSL 2 BASIC8.55□□□□□ -1.04
P04436 MSRA-205ENST00000518255 674 ntTSL 5 BASIC8.55□□□□□ -1.04
P04436 IGLVI-56-201ENST00000521342 342 ntBASIC8.55□□□□□ -1.04
P04436 AC105219.3-201ENST00000527579 374 ntTSL 2 BASIC8.55□□□□□ -1.04
P04436 AC116456.1-202ENST00000528151 597 ntTSL 4 BASIC8.55□□□□□ -1.04
P04436 AP001767.3-201ENST00000533329 436 ntTSL 5 BASIC8.55□□□□□ -1.04
P04436 AP003170.1-201ENST00000536944 1030 ntBASIC8.55□□□□□ -1.04
Retrieved 100 of 98,524 protein–RNA pairs in 157.7 ms