Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 ACSS3-203ENST00000548058 9254 ntAPPRIS P3 TSL 1 (best) BASIC9.92□□□□□ -0.82
LMO3Q8TAP4 TBC1D14-206ENST00000446947 4021 ntTSL 5 BASIC9.92□□□□□ -0.82
LMO3Q8TAP4 FTO-217ENST00000637001 1609 ntTSL 5 BASIC9.92□□□□□ -0.82
LMO3Q8TAP4 GID8-201ENST00000266069 4397 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
LMO3Q8TAP4 RNPC3-202ENST00000524631 2013 ntAPPRIS ALT1 TSL 2 BASIC9.92□□□□□ -0.82
LMO3Q8TAP4 FRG2LP-201ENST00000586090 1563 ntBASIC9.92□□□□□ -0.82
LMO3Q8TAP4 PLD5-208ENST00000536534 8721 ntAPPRIS P3 TSL 1 (best) BASIC9.92□□□□□ -0.82
LMO3Q8TAP4 DNASE1-201ENST00000246949 4200 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
LMO3Q8TAP4 TTC14-201ENST00000296015 2881 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
LMO3Q8TAP4 PRAMEF33-201ENST00000437300 1518 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
LMO3Q8TAP4 ALDH7A1P1-201ENST00000510973 1533 ntBASIC9.92□□□□□ -0.82
LMO3Q8TAP4 ZNF185-201ENST00000318504 4148 ntAPPRIS ALT2 TSL 5 BASIC9.92□□□□□ -0.82
LMO3Q8TAP4 PDE4DIP-219ENST00000524974 8305 ntAPPRIS ALT2 TSL 5 BASIC9.92□□□□□ -0.82
LMO3Q8TAP4 ZNF776-201ENST00000317178 5292 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
LMO3Q8TAP4 ATXN7L1-201ENST00000318724 1470 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
LMO3Q8TAP4 PTGER4P2-CDK2AP2P2-201ENST00000619442 3123 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
LMO3Q8TAP4 CACNA1S-202ENST00000367338 5996 ntAPPRIS ALT2 TSL 5 BASIC9.91□□□□□ -0.82
LMO3Q8TAP4 ZNF366-201ENST00000318442 3830 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
LMO3Q8TAP4 NVL-211ENST00000469075 2566 ntAPPRIS ALT2 TSL 2 BASIC9.91□□□□□ -0.82
LMO3Q8TAP4 CACNA1C-205ENST00000399591 6535 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
LMO3Q8TAP4 CACNA1C-206ENST00000399595 6535 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
LMO3Q8TAP4 SERPINB3-201ENST00000283752 1777 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
LMO3Q8TAP4 ZMYM3-205ENST00000373984 5253 ntTSL 5 BASIC9.91□□□□□ -0.82
LMO3Q8TAP4 TGFB3-201ENST00000238682 2522 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
LMO3Q8TAP4 AL034417.4-201ENST00000641354 2101 ntBASIC9.91□□□□□ -0.82
LMO3Q8TAP4 WIPF2-201ENST00000323571 7474 ntAPPRIS P2 TSL 1 (best) BASIC9.91□□□□□ -0.82
LMO3Q8TAP4 DCTN1-205ENST00000409567 4024 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
LMO3Q8TAP4 CCDC65-201ENST00000266984 2084 ntTSL 5 BASIC9.91□□□□□ -0.82
LMO3Q8TAP4 DCLRE1C-207ENST00000378255 2807 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
LMO3Q8TAP4 SCN5A-205ENST00000423572 8362 ntAPPRIS ALT1 TSL 1 (best) BASIC9.91□□□□□ -0.82
LMO3Q8TAP4 C17orf80-206ENST00000577615 2049 ntAPPRIS ALT2 TSL 2 BASIC9.91□□□□□ -0.82
LMO3Q8TAP4 PRR27-201ENST00000344526 3127 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
LMO3Q8TAP4 PPP1R14D-201ENST00000299174 757 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
LMO3Q8TAP4 RNA5SP349-201ENST00000363743 109 ntBASIC9.91□□□□□ -0.82
LMO3Q8TAP4 C4BPB-202ENST00000367076 1113 ntAPPRIS ALT1 TSL 1 (best) BASIC9.91□□□□□ -0.82
LMO3Q8TAP4 S100A8-201ENST00000368732 495 ntAPPRIS P1 TSL 3 BASIC9.91□□□□□ -0.82
LMO3Q8TAP4 TMEM252-201ENST00000377311 1245 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
LMO3Q8TAP4 PPP1R14D-202ENST00000427255 747 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
LMO3Q8TAP4 FAM136BP-201ENST00000428729 417 ntBASIC9.91□□□□□ -0.82
LMO3Q8TAP4 AL121748.2-201ENST00000451530 781 ntTSL 2 BASIC9.91□□□□□ -0.82
LMO3Q8TAP4 ST13P18-201ENST00000456632 1027 ntBASIC9.91□□□□□ -0.82
LMO3Q8TAP4 AC097493.2-201ENST00000468675 780 ntBASIC9.91□□□□□ -0.82
LMO3Q8TAP4 RN7SL144P-201ENST00000475761 295 ntBASIC9.91□□□□□ -0.82
LMO3Q8TAP4 RNU1-125P-201ENST00000516752 129 ntBASIC9.91□□□□□ -0.82
LMO3Q8TAP4 AF121898.1-203ENST00000518494 826 ntTSL 3 BASIC9.91□□□□□ -0.82
LMO3Q8TAP4 OR8B10P-201ENST00000529692 932 ntBASIC9.91□□□□□ -0.82
LMO3Q8TAP4 AC107884.1-203ENST00000530846 628 ntTSL 3 BASIC9.91□□□□□ -0.82
LMO3Q8TAP4 MIR100HG-211ENST00000531071 970 ntTSL 3 BASIC9.91□□□□□ -0.82
LMO3Q8TAP4 CRYAB-213ENST00000533475 1119 ntAPPRIS P1 TSL 5 BASIC9.91□□□□□ -0.82
LMO3Q8TAP4 TMED10P1-201ENST00000534816 655 ntBASIC9.91□□□□□ -0.82
LMO3Q8TAP4 WTAPP1-203ENST00000537774 400 ntBASIC9.91□□□□□ -0.82
LMO3Q8TAP4 AL139023.1-201ENST00000548280 508 ntTSL 4 BASIC9.91□□□□□ -0.82
LMO3Q8TAP4 GLYCAM1-204ENST00000550226 781 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
LMO3Q8TAP4 AC078923.1-202ENST00000552466 712 ntTSL 5 BASIC9.91□□□□□ -0.82
LMO3Q8TAP4 LINC01146-204ENST00000556033 833 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
LMO3Q8TAP4 AC079766.1-201ENST00000608774 427 ntBASIC9.91□□□□□ -0.82
LMO3Q8TAP4 Metazoa_SRP.159-201ENST00000612585 265 ntBASIC9.91□□□□□ -0.82
LMO3Q8TAP4 FAM74A4-202ENST00000618177 469 ntBASIC9.91□□□□□ -0.82
LMO3Q8TAP4 AC009152.1-201ENST00000618290 556 ntBASIC9.91□□□□□ -0.82
LMO3Q8TAP4 DANCR-205ENST00000623036 748 ntTSL 5 BASIC9.91□□□□□ -0.82
LMO3Q8TAP4 AC098476.1-201ENST00000623173 1025 ntBASIC9.91□□□□□ -0.82
LMO3Q8TAP4 AP001767.4-201ENST00000624584 452 ntBASIC9.91□□□□□ -0.82
LMO3Q8TAP4 EAF1-AS1-212ENST00000626521 561 ntTSL 5 BASIC9.91□□□□□ -0.82
LMO3Q8TAP4 SCN5A-204ENST00000414099 8303 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
LMO3Q8TAP4 SF3A3-201ENST00000373019 3673 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
LMO3Q8TAP4 TADA2A-202ENST00000612272 1948 ntAPPRIS P1 TSL 2 BASIC9.91□□□□□ -0.82
LMO3Q8TAP4 AC008739.5-201ENST00000623035 1938 ntBASIC9.91□□□□□ -0.82
LMO3Q8TAP4 GUCY1A2-203ENST00000526355 16205 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
LMO3Q8TAP4 ESRRG-207ENST00000366940 5314 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
LMO3Q8TAP4 THAP9-AS1-204ENST00000504792 2577 ntTSL 2 BASIC9.91□□□□□ -0.82
LMO3Q8TAP4 MSRB3-212ENST00000614640 4270 ntAPPRIS P1 TSL 3 BASIC9.91□□□□□ -0.82
LMO3Q8TAP4 CELF2-215ENST00000636488 3908 ntTSL 5 BASIC9.91□□□□□ -0.82
LMO3Q8TAP4 LINC01660-204ENST00000619172 3572 ntTSL 5 BASIC9.91□□□□□ -0.82
LMO3Q8TAP4 PFKM-210ENST00000547587 2867 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
LMO3Q8TAP4 C8orf44-201ENST00000390159 1817 ntAPPRIS P2 TSL 2 BASIC9.91□□□□□ -0.82
LMO3Q8TAP4 POLR3B-202ENST00000539066 4118 ntTSL 2 BASIC9.91□□□□□ -0.82
LMO3Q8TAP4 SLC25A13-201ENST00000265631 3136 ntAPPRIS P3 TSL 1 (best) BASIC9.91□□□□□ -0.82
LMO3Q8TAP4 RIPOR2-202ENST00000378023 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
LMO3Q8TAP4 MSH6-201ENST00000234420 7476 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
LMO3Q8TAP4 BRCA1-219ENST00000491747 2379 ntTSL 5 BASIC9.9□□□□□ -0.82
LMO3Q8TAP4 TSPAN18-201ENST00000340160 4229 ntAPPRIS P1 TSL 5 BASIC9.9□□□□□ -0.82
LMO3Q8TAP4 CHD3-201ENST00000330494 7328 ntAPPRIS P4 TSL 1 (best) BASIC9.9□□□□□ -0.82
LMO3Q8TAP4 RYR2-202ENST00000366574 16562 ntAPPRIS P2 TSL 1 (best) BASIC9.9□□□□□ -0.82
LMO3Q8TAP4 CHN2-211ENST00000424025 2279 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
LMO3Q8TAP4 NLRC5-203ENST00000436936 6724 ntAPPRIS P3 TSL 5 BASIC9.9□□□□□ -0.82
LMO3Q8TAP4 NEK6-204ENST00000373603 3447 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
LMO3Q8TAP4 AFDN-207ENST00000400822 7593 ntTSL 5 BASIC9.9□□□□□ -0.82
LMO3Q8TAP4 EIF4G2-201ENST00000339995 3978 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.82
LMO3Q8TAP4 NLN-201ENST00000380985 8661 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
LMO3Q8TAP4 DHX40-201ENST00000251241 3660 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
LMO3Q8TAP4 ABCE1-201ENST00000296577 3921 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
LMO3Q8TAP4 GRB10-203ENST00000398810 4785 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
LMO3Q8TAP4 PPIL2-203ENST00000406385 3875 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
LMO3Q8TAP4 OR2AG2-201ENST00000338569 1069 ntAPPRIS P1 BASIC9.9□□□□□ -0.82
LMO3Q8TAP4 SRSF10-206ENST00000374453 866 ntTSL 5 BASIC9.9□□□□□ -0.82
LMO3Q8TAP4 SUN5-203ENST00000375523 1153 ntAPPRIS ALT2 TSL 5 BASIC9.9□□□□□ -0.82
LMO3Q8TAP4 LST1-209ENST00000376096 565 ntTSL 2 BASIC9.9□□□□□ -0.82
LMO3Q8TAP4 RLN2-201ENST00000381627 1177 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
LMO3Q8TAP4 ERICH2-201ENST00000409885 601 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
LMO3Q8TAP4 ZNF70P1-201ENST00000417480 624 ntBASIC9.9□□□□□ -0.82
Retrieved 100 of 98,524 protein–RNA pairs in 65.1 ms