Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 MYO7B-201ENST00000409090 3567 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
P04436 SLC12A5-205ENST00000454036 3593 ntTSL 5 BASIC8.62□□□□□ -1.03
P04436 LINC00598-214ENST00000637523 1943 ntTSL 5 BASIC8.62□□□□□ -1.03
P04436 PCDH19-203ENST00000420881 7936 ntAPPRIS ALT2 TSL 1 (best) BASIC8.62□□□□□ -1.03
P04436 LINC01949-201ENST00000445770 2721 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
P04436 KDM4D-203ENST00000610872 2191 ntAPPRIS P1 BASIC8.62□□□□□ -1.03
P04436 MMP2-208ENST00000570308 3235 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
P04436 CSMD1-218ENST00000635120 11737 ntAPPRIS P2 TSL 5 BASIC8.62□□□□□ -1.03
P04436 GNL3L-202ENST00000360845 2135 ntAPPRIS P1 TSL 5 BASIC8.62□□□□□ -1.03
P04436 SRPK2-202ENST00000393651 3650 ntAPPRIS ALT2 TSL 2 BASIC8.62□□□□□ -1.03
P04436 AC040162.3-201ENST00000572067 3907 ntBASIC8.62□□□□□ -1.03
P04436 DCAF1-203ENST00000504652 5951 ntAPPRIS ALT2 TSL 1 (best) BASIC8.62□□□□□ -1.03
P04436 SH3GLB1-205ENST00000616170 6456 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
P04436 EFHB-201ENST00000295824 2823 ntAPPRIS P3 TSL 1 (best) BASIC8.62□□□□□ -1.03
P04436 TIA1-204ENST00000416149 821 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
P04436 PDCL3P6-201ENST00000429744 706 ntBASIC8.62□□□□□ -1.03
P04436 Z83841.1-201ENST00000433173 968 ntBASIC8.62□□□□□ -1.03
P04436 MTPN-202ENST00000435723 879 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
P04436 AL389889.1-201ENST00000443747 566 ntTSL 4 BASIC8.62□□□□□ -1.03
P04436 OR5BH1P-201ENST00000454101 919 ntBASIC8.62□□□□□ -1.03
P04436 AL391883.1-201ENST00000454736 447 ntTSL 2 BASIC8.62□□□□□ -1.03
P04436 RN7SL7P-201ENST00000467823 298 ntBASIC8.62□□□□□ -1.03
P04436 RN7SL698P-201ENST00000480095 302 ntBASIC8.62□□□□□ -1.03
P04436 RN7SL482P-201ENST00000487928 298 ntBASIC8.62□□□□□ -1.03
P04436 TBCA-208ENST00000520361 446 ntTSL 2 BASIC8.62□□□□□ -1.03
P04436 CARD8-224ENST00000522431 622 ntTSL 2 BASIC8.62□□□□□ -1.03
P04436 TDGF1P5-201ENST00000523009 453 ntBASIC8.62□□□□□ -1.03
P04436 AC069287.2-201ENST00000526963 574 ntTSL 3 BASIC8.62□□□□□ -1.03
P04436 AC004803.1-202ENST00000545629 569 ntTSL 3 BASIC8.62□□□□□ -1.03
P04436 ITFG2-AS1-203ENST00000547794 442 ntTSL 2 BASIC8.62□□□□□ -1.03
P04436 AL358334.1-201ENST00000557152 174 ntTSL 5 BASIC8.62□□□□□ -1.03
P04436 AC023906.5-201ENST00000558607 635 ntTSL 2 BASIC8.62□□□□□ -1.03
P04436 AC103982.1-201ENST00000561358 571 ntTSL 4 BASIC8.62□□□□□ -1.03
P04436 BMF-210ENST00000561360 735 ntAPPRIS P1 TSL 3 BASIC8.62□□□□□ -1.03
P04436 AC010760.1-201ENST00000565129 545 ntTSL 2 BASIC8.62□□□□□ -1.03
P04436 RN7SL140P-201ENST00000581321 294 ntBASIC8.62□□□□□ -1.03
P04436 FAM95B1-204ENST00000586273 798 ntTSL 5 BASIC8.62□□□□□ -1.03
P04436 FAM95B1-207ENST00000589112 768 ntTSL 5 BASIC8.62□□□□□ -1.03
P04436 LINC01926-201ENST00000589476 478 ntTSL 2 BASIC8.62□□□□□ -1.03
P04436 MIR6831-201ENST00000617240 81 ntBASIC8.62□□□□□ -1.03
P04436 Z97987.1-201ENST00000618051 433 ntTSL 3 BASIC8.62□□□□□ -1.03
P04436 CU633904.1-204ENST00000624907 777 ntTSL 3 BASIC8.62□□□□□ -1.03
P04436 Metazoa_SRP.208-201ENST00000629083 297 ntBASIC8.62□□□□□ -1.03
P04436 AC135068.7-201ENST00000630145 568 ntTSL 2 BASIC8.62□□□□□ -1.03
P04436 TUBA1C-210ENST00000639419 1075 ntTSL 5 BASIC8.62□□□□□ -1.03
P04436 C15orf53-201ENST00000318792 2043 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
P04436 BLOC1S2-203ENST00000441611 2024 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
P04436 NCF2-203ENST00000413720 2276 ntTSL 2 BASIC8.62□□□□□ -1.03
P04436 TTLL6-205ENST00000433608 2548 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
P04436 ANO2-211ENST00000546188 3702 ntAPPRIS ALT2 TSL 1 (best) BASIC8.62□□□□□ -1.03
P04436 SLAMF8-201ENST00000289707 2996 ntAPPRIS P3 TSL 1 (best) BASIC8.62□□□□□ -1.03
P04436 ASB15-201ENST00000275699 2706 ntAPPRIS P1 TSL 5 BASIC8.62□□□□□ -1.03
P04436 AC120036.5-201ENST00000528139 2491 ntBASIC8.62□□□□□ -1.03
P04436 PSMF1-202ENST00000333082 3686 ntAPPRIS P3 TSL 1 (best) BASIC8.62□□□□□ -1.03
P04436 AP000708.1-201ENST00000527818 3423 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
P04436 SPDYE16-202ENST00000632547 3434 ntAPPRIS P5 TSL 5 BASIC8.62□□□□□ -1.03
P04436 GOLGA6A-201ENST00000290438 3176 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
P04436 PRAMEF1-201ENST00000332296 2160 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
P04436 SEMA4A-205ENST00000368286 3135 ntTSL 5 BASIC8.62□□□□□ -1.03
P04436 TRIT1-203ENST00000441669 1851 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
P04436 POLR3G-204ENST00000504930 3251 ntAPPRIS P1 TSL 2 BASIC8.62□□□□□ -1.03
P04436 TEX10-204ENST00000535814 3006 ntTSL 2 BASIC8.62□□□□□ -1.03
P04436 SPATS2L-206ENST00000409385 2320 ntTSL 2 BASIC8.62□□□□□ -1.03
P04436 MTO1-201ENST00000370300 2961 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
P04436 AL590426.1-201ENST00000440811 2285 ntBASIC8.61□□□□□ -1.03
P04436 SLC8A1-205ENST00000405901 3139 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
P04436 CNTNAP4-201ENST00000307431 4867 ntAPPRIS ALT1 TSL 5 BASIC8.61□□□□□ -1.03
P04436 CNTNAP4-207ENST00000611870 4867 ntAPPRIS P2 TSL 1 (best) BASIC8.61□□□□□ -1.03
P04436 RBM23-204ENST00000399922 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC8.61□□□□□ -1.03
P04436 HMGCLL1-206ENST00000428842 2437 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
P04436 LEO1-202ENST00000315141 1981 ntTSL 2 BASIC8.61□□□□□ -1.03
P04436 DCTN6-201ENST00000221114 1127 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
P04436 SPIN2B-201ENST00000275988 1152 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
P04436 GNG8-201ENST00000300873 216 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
P04436 GNRHR2-202ENST00000361928 1035 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
P04436 ST3GAL3-214ENST00000372366 670 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
P04436 HBE1-202ENST00000380237 913 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
P04436 ZNF343-203ENST00000381253 819 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
P04436 TRBV3-1-201ENST00000390387 391 ntAPPRIS P1 BASIC8.61□□□□□ -1.03
P04436 TRAV2-201ENST00000390424 348 ntAPPRIS P1 BASIC8.61□□□□□ -1.03
P04436 GPR55-202ENST00000392040 3828 ntAPPRIS P1 TSL 5 BASIC8.61□□□□□ -1.03
P04436 MAP3K7CL-205ENST00000399926 749 ntAPPRIS P1 TSL 3 BASIC8.61□□□□□ -1.03
P04436 OSTCP6-201ENST00000407493 457 ntBASIC8.61□□□□□ -1.03
P04436 LINC00114-202ENST00000429621 827 ntTSL 5 BASIC8.61□□□□□ -1.03
P04436 AC016738.2-203ENST00000433012 489 ntTSL 3 BASIC8.61□□□□□ -1.03
P04436 ATP6AP2-204ENST00000447485 1254 ntTSL 5 BASIC8.61□□□□□ -1.03
P04436 AC073626.2-201ENST00000449443 316 ntBASIC8.61□□□□□ -1.03
P04436 FTLP18-201ENST00000453860 523 ntBASIC8.61□□□□□ -1.03
P04436 AL683842.1-201ENST00000455505 525 ntBASIC8.61□□□□□ -1.03
P04436 DCTN6-203ENST00000520829 880 ntTSL 2 BASIC8.61□□□□□ -1.03
P04436 KCTD21-AS1-205ENST00000530261 910 ntTSL 4 BASIC8.61□□□□□ -1.03
P04436 AC009248.1-201ENST00000548155 735 ntBASIC8.61□□□□□ -1.03
P04436 AC138331.1-201ENST00000549993 376 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
P04436 AC079907.2-201ENST00000550307 1034 ntTSL 3 BASIC8.61□□□□□ -1.03
P04436 AL160314.2-201ENST00000554857 662 ntTSL 4 BASIC8.61□□□□□ -1.03
P04436 AC060814.3-201ENST00000557717 460 ntBASIC8.61□□□□□ -1.03
P04436 AC007218.1-201ENST00000561538 660 ntTSL 3 BASIC8.61□□□□□ -1.03
P04436 AC009101.2-202ENST00000564851 490 ntBASIC8.61□□□□□ -1.03
P04436 LINC00555-201ENST00000569288 442 ntBASIC8.61□□□□□ -1.03
P04436 RN7SL726P-201ENST00000605957 299 ntBASIC8.61□□□□□ -1.03
Retrieved 100 of 98,524 protein–RNA pairs in 84.5 ms