Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 PHTF2-205ENST00000416283 5198 ntTSL 5 BASIC9.98□□□□□ -0.81
MTHFRP42898 CCDC80-202ENST00000439685 3557 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
MTHFRP42898 TBX22-201ENST00000373294 2249 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
MTHFRP42898 MCPH1-203ENST00000519480 2917 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
MTHFRP42898 ARNTL2-202ENST00000266503 2291 ntAPPRIS P3 TSL 1 (best) BASIC9.98□□□□□ -0.81
MTHFRP42898 SCMH1-211ENST00000456518 1586 ntTSL 2 BASIC9.98□□□□□ -0.81
MTHFRP42898 FTO-217ENST00000637001 1609 ntTSL 5 BASIC9.98□□□□□ -0.81
MTHFRP42898 ZSCAN31-209ENST00000439158 3050 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
MTHFRP42898 MROH5-205ENST00000621837 4164 ntAPPRIS ALT2 TSL 5 BASIC9.98□□□□□ -0.81
MTHFRP42898 ARL5C-201ENST00000269586 540 ntAPPRIS P1 TSL 5 BASIC9.98□□□□□ -0.81
MTHFRP42898 NCR2-202ENST00000373086 1000 ntAPPRIS ALT2 TSL 1 (best) BASIC9.98□□□□□ -0.81
MTHFRP42898 RNA5SP304-201ENST00000411199 104 ntBASIC9.98□□□□□ -0.81
MTHFRP42898 AC099560.1-201ENST00000412811 500 ntTSL 4 BASIC9.98□□□□□ -0.81
MTHFRP42898 EIF3KP2-201ENST00000415266 626 ntBASIC9.98□□□□□ -0.81
MTHFRP42898 GCNT1P1-201ENST00000416567 1295 ntBASIC9.98□□□□□ -0.81
MTHFRP42898 AL136366.1-201ENST00000416996 964 ntTSL 2 BASIC9.98□□□□□ -0.81
MTHFRP42898 AP001596.1-203ENST00000421771 1078 ntTSL 3 BASIC9.98□□□□□ -0.81
MTHFRP42898 AC073346.1-202ENST00000430610 544 ntTSL 3 BASIC9.98□□□□□ -0.81
MTHFRP42898 RN7SL507P-201ENST00000474076 296 ntBASIC9.98□□□□□ -0.81
MTHFRP42898 AC100771.1-201ENST00000496450 279 ntBASIC9.98□□□□□ -0.81
MTHFRP42898 OR4B2P-201ENST00000527724 882 ntBASIC9.98□□□□□ -0.81
MTHFRP42898 TMED10P1-201ENST00000534816 655 ntBASIC9.98□□□□□ -0.81
MTHFRP42898 CYP4A26P-201ENST00000563017 196 ntBASIC9.98□□□□□ -0.81
MTHFRP42898 AC009075.1-201ENST00000563347 391 ntTSL 3 BASIC9.98□□□□□ -0.81
MTHFRP42898 USP2-AS1-205ENST00000578923 895 ntTSL 2 BASIC9.98□□□□□ -0.81
MTHFRP42898 AC008751.1-201ENST00000600438 342 ntBASIC9.98□□□□□ -0.81
MTHFRP42898 ZNF75A-209ENST00000612186 1118 ntBASIC9.98□□□□□ -0.81
MTHFRP42898 uc_338.35-201ENST00000616802 163 ntBASIC9.98□□□□□ -0.81
MTHFRP42898 AC024257.4-201ENST00000618746 458 ntBASIC9.98□□□□□ -0.81
MTHFRP42898 SUGT1P3-205ENST00000633814 572 ntTSL 3 BASIC9.98□□□□□ -0.81
MTHFRP42898 AL603840.1-202ENST00000634769 583 ntTSL 5 BASIC9.98□□□□□ -0.81
MTHFRP42898 CASP7-205ENST00000369331 2380 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
MTHFRP42898 L3MBTL4-AS1-201ENST00000578427 2044 ntTSL 5 BASIC9.98□□□□□ -0.81
MTHFRP42898 RNF38-206ENST00000377885 4985 ntAPPRIS P1 TSL 5 BASIC9.98□□□□□ -0.81
MTHFRP42898 AC060780.1-203ENST00000634503 2406 ntTSL 3 BASIC9.98□□□□□ -0.81
MTHFRP42898 MEF2C-203ENST00000437473 4340 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
MTHFRP42898 XKRX-201ENST00000372956 2848 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
MTHFRP42898 PIK3R1-216ENST00000523872 2473 ntTSL 2 BASIC9.98□□□□□ -0.81
MTHFRP42898 SETD5-201ENST00000302463 4786 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
MTHFRP42898 AP001178.3-201ENST00000585150 2106 ntTSL 2 BASIC9.98□□□□□ -0.81
MTHFRP42898 AL034417.4-201ENST00000641354 2101 ntBASIC9.98□□□□□ -0.81
MTHFRP42898 ABHD2-201ENST00000352732 8735 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
MTHFRP42898 SERPINB3-201ENST00000283752 1777 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
MTHFRP42898 AL354685.1-201ENST00000427866 1755 ntBASIC9.98□□□□□ -0.81
MTHFRP42898 ALDH7A1-232ENST00000637272 2554 ntAPPRIS ALT1 TSL 5 BASIC9.98□□□□□ -0.81
MTHFRP42898 LINC01226-208ENST00000640623 5019 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
MTHFRP42898 SAMMSON-218ENST00000641601 1847 ntBASIC9.98□□□□□ -0.81
MTHFRP42898 MAPK8-205ENST00000374182 5638 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
MTHFRP42898 SIX1-201ENST00000247182 3996 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
MTHFRP42898 RRP12-202ENST00000370992 4425 ntAPPRIS P3 TSL 1 (best) BASIC9.98□□□□□ -0.81
MTHFRP42898 FCRLA-201ENST00000236938 2341 ntAPPRIS P3 TSL 1 (best) BASIC9.98□□□□□ -0.81
MTHFRP42898 PC-202ENST00000393958 4005 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
MTHFRP42898 AC008014.1-203ENST00000611243 1569 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
MTHFRP42898 NUTM1-202ENST00000438749 3922 ntAPPRIS ALT2 TSL 2 BASIC9.97□□□□□ -0.81
MTHFRP42898 EXT2-203ENST00000395673 3454 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
MTHFRP42898 LINC01310-201ENST00000380981 4015 ntTSL 2 BASIC9.97□□□□□ -0.81
MTHFRP42898 NF1P4-201ENST00000549579 1681 ntBASIC9.97□□□□□ -0.81
MTHFRP42898 ARSF-202ENST00000381127 2164 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
MTHFRP42898 NUDCD2-201ENST00000302764 8005 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
MTHFRP42898 SYNE1-203ENST00000354674 3154 ntTSL 5 BASIC9.97□□□□□ -0.81
MTHFRP42898 CCT2-203ENST00000544368 1728 ntTSL 5 BASIC9.97□□□□□ -0.81
MTHFRP42898 MLF1-202ENST00000359117 2222 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
MTHFRP42898 OXGR1-201ENST00000298440 2285 ntAPPRIS P1 TSL 2 BASIC9.97□□□□□ -0.81
MTHFRP42898 AC023509.2-201ENST00000548347 2297 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
MTHFRP42898 KBTBD12-204ENST00000407609 4302 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
MTHFRP42898 SVBP-201ENST00000372521 658 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
MTHFRP42898 SNORA42.2-201ENST00000384771 134 ntBASIC9.97□□□□□ -0.81
MTHFRP42898 AL390866.1-201ENST00000425137 469 ntTSL 5 BASIC9.97□□□□□ -0.81
MTHFRP42898 BSNDP4-201ENST00000436076 388 ntBASIC9.97□□□□□ -0.81
MTHFRP42898 AL157714.1-201ENST00000448964 625 ntBASIC9.97□□□□□ -0.81
MTHFRP42898 AC098613.1-201ENST00000451485 656 ntTSL 3 BASIC9.97□□□□□ -0.81
MTHFRP42898 AC004534.1-201ENST00000462678 489 ntBASIC9.97□□□□□ -0.81
MTHFRP42898 AC026798.1-201ENST00000468490 482 ntBASIC9.97□□□□□ -0.81
MTHFRP42898 LINC00698-204ENST00000475886 758 ntTSL 5 BASIC9.97□□□□□ -0.81
MTHFRP42898 TDGF1P3-201ENST00000493351 567 ntBASIC9.97□□□□□ -0.81
MTHFRP42898 LINC02142-201ENST00000500616 577 ntTSL 3 BASIC9.97□□□□□ -0.81
MTHFRP42898 RBM48P1-201ENST00000509661 1102 ntBASIC9.97□□□□□ -0.81
MTHFRP42898 IGHVIII-51-1-201ENST00000519403 302 ntBASIC9.97□□□□□ -0.81
MTHFRP42898 AC104117.3-201ENST00000519491 674 ntTSL 3 BASIC9.97□□□□□ -0.81
MTHFRP42898 AC091939.1-201ENST00000522704 691 ntTSL 3 BASIC9.97□□□□□ -0.81
MTHFRP42898 ANKRD42-206ENST00000528722 954 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
MTHFRP42898 UBB-204ENST00000535788 704 ntTSL 2 BASIC9.97□□□□□ -0.81
MTHFRP42898 PLBD1-AS1-201ENST00000542401 539 ntTSL 4 BASIC9.97□□□□□ -0.81
MTHFRP42898 AC090115.1-201ENST00000548257 562 ntTSL 4 BASIC9.97□□□□□ -0.81
MTHFRP42898 AC119044.1-201ENST00000553227 404 ntBASIC9.97□□□□□ -0.81
MTHFRP42898 AL356019.1-201ENST00000553419 748 ntTSL 2 BASIC9.97□□□□□ -0.81
MTHFRP42898 AL354733.2-205ENST00000590813 621 ntTSL 5 BASIC9.97□□□□□ -0.81
MTHFRP42898 AC004221.1-201ENST00000592843 844 ntTSL 5 BASIC9.97□□□□□ -0.81
MTHFRP42898 AC006115.3-201ENST00000594400 560 ntTSL 4 BASIC9.97□□□□□ -0.81
MTHFRP42898 AC243571.2-202ENST00000613901 575 ntTSL 4 BASIC9.97□□□□□ -0.81
MTHFRP42898 LAMTOR5-AS1-236ENST00000626261 464 ntTSL 5 BASIC9.97□□□□□ -0.81
MTHFRP42898 USP6-205ENST00000574788 8464 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
MTHFRP42898 PCDHA10-203ENST00000562220 12358 ntBASIC9.97□□□□□ -0.81
MTHFRP42898 AC022034.2-201ENST00000426023 2387 ntTSL 2 BASIC9.97□□□□□ -0.81
MTHFRP42898 ZNF148-207ENST00000492394 2949 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
MTHFRP42898 TRPV1-202ENST00000399756 4068 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
MTHFRP42898 ATP2B2-201ENST00000352432 8593 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
MTHFRP42898 ZNF155-201ENST00000270014 2596 ntAPPRIS P3 TSL 1 (best) BASIC9.97□□□□□ -0.81
MTHFRP42898 AC083902.2-201ENST00000511828 10086 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
MTHFRP42898 ABCC11-201ENST00000353782 4463 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Retrieved 100 of 98,524 protein–RNA pairs in 82 ms