Protein–RNA interactions for Protein: Q9Y6A9

SPCS1, Signal peptidase complex subunit 1, humanhuman

Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS1Q9Y6A9 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC14.19□□□□□ -0.14
SPCS1Q9Y6A9 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC14.19□□□□□ -0.14
SPCS1Q9Y6A9 KLF16-203ENST00000592313 508 ntTSL 3 BASIC14.19□□□□□ -0.14
SPCS1Q9Y6A9 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SPCS1Q9Y6A9 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SPCS1Q9Y6A9 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SPCS1Q9Y6A9 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SPCS1Q9Y6A9 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC14.19□□□□□ -0.14
SPCS1Q9Y6A9 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
SPCS1Q9Y6A9 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
SPCS1Q9Y6A9 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SPCS1Q9Y6A9 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC14.18□□□□□ -0.14
SPCS1Q9Y6A9 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
SPCS1Q9Y6A9 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SPCS1Q9Y6A9 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC14.18□□□□□ -0.14
SPCS1Q9Y6A9 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
SPCS1Q9Y6A9 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
SPCS1Q9Y6A9 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SPCS1Q9Y6A9 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC14.18□□□□□ -0.14
SPCS1Q9Y6A9 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SPCS1Q9Y6A9 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
SPCS1Q9Y6A9 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SPCS1Q9Y6A9 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC14.18□□□□□ -0.14
SPCS1Q9Y6A9 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
SPCS1Q9Y6A9 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC14.18□□□□□ -0.14
SPCS1Q9Y6A9 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
SPCS1Q9Y6A9 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SPCS1Q9Y6A9 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
SPCS1Q9Y6A9 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SPCS1Q9Y6A9 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
SPCS1Q9Y6A9 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
SPCS1Q9Y6A9 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
SPCS1Q9Y6A9 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
SPCS1Q9Y6A9 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC14.18□□□□□ -0.14
SPCS1Q9Y6A9 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC14.18□□□□□ -0.14
SPCS1Q9Y6A9 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC14.18□□□□□ -0.14
SPCS1Q9Y6A9 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SPCS1Q9Y6A9 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
SPCS1Q9Y6A9 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
SPCS1Q9Y6A9 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SPCS1Q9Y6A9 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
SPCS1Q9Y6A9 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
SPCS1Q9Y6A9 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
SPCS1Q9Y6A9 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SPCS1Q9Y6A9 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SPCS1Q9Y6A9 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SPCS1Q9Y6A9 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC14.17□□□□□ -0.14
SPCS1Q9Y6A9 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SPCS1Q9Y6A9 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SPCS1Q9Y6A9 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SPCS1Q9Y6A9 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SPCS1Q9Y6A9 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
SPCS1Q9Y6A9 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SPCS1Q9Y6A9 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SPCS1Q9Y6A9 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SPCS1Q9Y6A9 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SPCS1Q9Y6A9 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SPCS1Q9Y6A9 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC14.17□□□□□ -0.14
SPCS1Q9Y6A9 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
SPCS1Q9Y6A9 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
SPCS1Q9Y6A9 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SPCS1Q9Y6A9 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
SPCS1Q9Y6A9 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SPCS1Q9Y6A9 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
SPCS1Q9Y6A9 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC14.17□□□□□ -0.14
SPCS1Q9Y6A9 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
SPCS1Q9Y6A9 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC14.17□□□□□ -0.14
SPCS1Q9Y6A9 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SPCS1Q9Y6A9 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SPCS1Q9Y6A9 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC14.17□□□□□ -0.14
SPCS1Q9Y6A9 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SPCS1Q9Y6A9 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC14.17□□□□□ -0.14
SPCS1Q9Y6A9 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SPCS1Q9Y6A9 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
SPCS1Q9Y6A9 AL049796.1-201ENST00000565336 1766 ntBASIC14.17□□□□□ -0.14
SPCS1Q9Y6A9 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC14.17□□□□□ -0.14
SPCS1Q9Y6A9 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
SPCS1Q9Y6A9 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SPCS1Q9Y6A9 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SPCS1Q9Y6A9 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SPCS1Q9Y6A9 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
SPCS1Q9Y6A9 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
SPCS1Q9Y6A9 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SPCS1Q9Y6A9 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SPCS1Q9Y6A9 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SPCS1Q9Y6A9 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC14.16□□□□□ -0.14
SPCS1Q9Y6A9 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SPCS1Q9Y6A9 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC14.16□□□□□ -0.14
SPCS1Q9Y6A9 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SPCS1Q9Y6A9 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SPCS1Q9Y6A9 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
SPCS1Q9Y6A9 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC14.16□□□□□ -0.14
SPCS1Q9Y6A9 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC14.16□□□□□ -0.14
SPCS1Q9Y6A9 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SPCS1Q9Y6A9 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SPCS1Q9Y6A9 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC14.16□□□□□ -0.14
SPCS1Q9Y6A9 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC14.16□□□□□ -0.14
SPCS1Q9Y6A9 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
SPCS1Q9Y6A9 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
SPCS1Q9Y6A9 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC14.16□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms