Protein–RNA interactions for Protein: Q9Y696

CLIC4, Chloride intracellular channel protein 4, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4Q9Y696 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
CLIC4Q9Y696 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
CLIC4Q9Y696 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC23.56■■□□□ 1.36
CLIC4Q9Y696 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
CLIC4Q9Y696 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC23.56■■□□□ 1.36
CLIC4Q9Y696 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC23.56■■□□□ 1.36
CLIC4Q9Y696 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC23.56■■□□□ 1.36
CLIC4Q9Y696 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC23.56■■□□□ 1.36
CLIC4Q9Y696 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
CLIC4Q9Y696 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
CLIC4Q9Y696 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC23.56■■□□□ 1.36
CLIC4Q9Y696 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
CLIC4Q9Y696 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC23.56■■□□□ 1.36
CLIC4Q9Y696 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC23.56■■□□□ 1.36
CLIC4Q9Y696 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC23.56■■□□□ 1.36
CLIC4Q9Y696 DET1-207ENST00000564406 2315 ntTSL 2 BASIC23.55■■□□□ 1.36
CLIC4Q9Y696 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC23.55■■□□□ 1.36
CLIC4Q9Y696 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC23.55■■□□□ 1.36
CLIC4Q9Y696 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
CLIC4Q9Y696 AC245052.3-201ENST00000450182 901 ntBASIC23.55■■□□□ 1.36
CLIC4Q9Y696 LGR4-203ENST00000480977 492 ntTSL 2 BASIC23.55■■□□□ 1.36
CLIC4Q9Y696 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
CLIC4Q9Y696 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC23.55■■□□□ 1.36
CLIC4Q9Y696 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC23.55■■□□□ 1.36
CLIC4Q9Y696 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC23.55■■□□□ 1.36
CLIC4Q9Y696 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
CLIC4Q9Y696 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC23.55■■□□□ 1.36
CLIC4Q9Y696 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC23.55■■□□□ 1.36
CLIC4Q9Y696 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
CLIC4Q9Y696 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC23.54■■□□□ 1.36
CLIC4Q9Y696 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC23.54■■□□□ 1.36
CLIC4Q9Y696 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
CLIC4Q9Y696 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
CLIC4Q9Y696 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC23.54■■□□□ 1.36
CLIC4Q9Y696 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC23.54■■□□□ 1.36
CLIC4Q9Y696 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC23.54■■□□□ 1.36
CLIC4Q9Y696 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC23.54■■□□□ 1.36
CLIC4Q9Y696 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC23.54■■□□□ 1.36
CLIC4Q9Y696 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC23.54■■□□□ 1.36
CLIC4Q9Y696 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC23.54■■□□□ 1.36
CLIC4Q9Y696 AC120498.10-201ENST00000621827 505 ntBASIC23.54■■□□□ 1.36
CLIC4Q9Y696 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC23.54■■□□□ 1.36
CLIC4Q9Y696 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
CLIC4Q9Y696 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
CLIC4Q9Y696 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
CLIC4Q9Y696 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
CLIC4Q9Y696 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
CLIC4Q9Y696 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC23.54■■□□□ 1.36
CLIC4Q9Y696 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
CLIC4Q9Y696 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC23.53■■□□□ 1.36
CLIC4Q9Y696 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC23.53■■□□□ 1.36
CLIC4Q9Y696 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
CLIC4Q9Y696 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
CLIC4Q9Y696 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC23.53■■□□□ 1.36
CLIC4Q9Y696 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
CLIC4Q9Y696 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
CLIC4Q9Y696 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC23.53■■□□□ 1.36
CLIC4Q9Y696 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC23.53■■□□□ 1.36
CLIC4Q9Y696 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
CLIC4Q9Y696 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC23.53■■□□□ 1.36
CLIC4Q9Y696 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC23.53■■□□□ 1.36
CLIC4Q9Y696 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
CLIC4Q9Y696 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC23.52■■□□□ 1.36
CLIC4Q9Y696 AL512408.1-201ENST00000569378 2000 ntBASIC23.52■■□□□ 1.36
CLIC4Q9Y696 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC23.52■■□□□ 1.36
CLIC4Q9Y696 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
CLIC4Q9Y696 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
CLIC4Q9Y696 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
CLIC4Q9Y696 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC23.52■■□□□ 1.36
CLIC4Q9Y696 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC23.52■■□□□ 1.36
CLIC4Q9Y696 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
CLIC4Q9Y696 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC23.52■■□□□ 1.36
CLIC4Q9Y696 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
CLIC4Q9Y696 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC23.52■■□□□ 1.36
CLIC4Q9Y696 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC23.52■■□□□ 1.36
CLIC4Q9Y696 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC23.52■■□□□ 1.36
CLIC4Q9Y696 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC23.52■■□□□ 1.36
CLIC4Q9Y696 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.35
CLIC4Q9Y696 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
CLIC4Q9Y696 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
CLIC4Q9Y696 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC23.51■■□□□ 1.35
CLIC4Q9Y696 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
CLIC4Q9Y696 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC23.51■■□□□ 1.35
CLIC4Q9Y696 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
CLIC4Q9Y696 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC23.51■■□□□ 1.35
CLIC4Q9Y696 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC23.51■■□□□ 1.35
CLIC4Q9Y696 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
CLIC4Q9Y696 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC23.51■■□□□ 1.35
CLIC4Q9Y696 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC23.51■■□□□ 1.35
CLIC4Q9Y696 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC23.51■■□□□ 1.35
CLIC4Q9Y696 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC23.51■■□□□ 1.35
CLIC4Q9Y696 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC23.51■■□□□ 1.35
CLIC4Q9Y696 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
CLIC4Q9Y696 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
CLIC4Q9Y696 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
CLIC4Q9Y696 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC23.51■■□□□ 1.35
CLIC4Q9Y696 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC23.51■■□□□ 1.35
CLIC4Q9Y696 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC23.51■■□□□ 1.35
CLIC4Q9Y696 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC23.5■■□□□ 1.35
CLIC4Q9Y696 PCDHAC2-203ENST00000615316 3011 ntBASIC23.5■■□□□ 1.35
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms