Protein–RNA interactions for Protein: Q9Y5G4

PCDHGA9, Protocadherin gamma-A9, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9Q9Y5G4 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
PCDHGA9Q9Y5G4 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC19.28■□□□□ 0.68
PCDHGA9Q9Y5G4 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC19.28■□□□□ 0.68
PCDHGA9Q9Y5G4 RPS2P4-201ENST00000476944 856 ntBASIC19.28■□□□□ 0.68
PCDHGA9Q9Y5G4 CASP6-205ENST00000505486 538 ntTSL 4 BASIC19.28■□□□□ 0.68
PCDHGA9Q9Y5G4 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PCDHGA9Q9Y5G4 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC19.28■□□□□ 0.68
PCDHGA9Q9Y5G4 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC19.28■□□□□ 0.68
PCDHGA9Q9Y5G4 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PCDHGA9Q9Y5G4 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PCDHGA9Q9Y5G4 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
PCDHGA9Q9Y5G4 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PCDHGA9Q9Y5G4 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
PCDHGA9Q9Y5G4 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
PCDHGA9Q9Y5G4 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PCDHGA9Q9Y5G4 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC19.28■□□□□ 0.68
PCDHGA9Q9Y5G4 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC19.28■□□□□ 0.68
PCDHGA9Q9Y5G4 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PCDHGA9Q9Y5G4 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
PCDHGA9Q9Y5G4 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PCDHGA9Q9Y5G4 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC19.27■□□□□ 0.68
PCDHGA9Q9Y5G4 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
PCDHGA9Q9Y5G4 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
PCDHGA9Q9Y5G4 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PCDHGA9Q9Y5G4 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
PCDHGA9Q9Y5G4 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
PCDHGA9Q9Y5G4 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC19.27■□□□□ 0.68
PCDHGA9Q9Y5G4 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC19.27■□□□□ 0.68
PCDHGA9Q9Y5G4 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
PCDHGA9Q9Y5G4 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
PCDHGA9Q9Y5G4 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
PCDHGA9Q9Y5G4 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC19.27■□□□□ 0.67
PCDHGA9Q9Y5G4 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.67
PCDHGA9Q9Y5G4 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
PCDHGA9Q9Y5G4 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PCDHGA9Q9Y5G4 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PCDHGA9Q9Y5G4 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
PCDHGA9Q9Y5G4 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC19.26■□□□□ 0.67
PCDHGA9Q9Y5G4 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
PCDHGA9Q9Y5G4 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
PCDHGA9Q9Y5G4 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
PCDHGA9Q9Y5G4 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC19.26■□□□□ 0.67
PCDHGA9Q9Y5G4 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC19.26■□□□□ 0.67
PCDHGA9Q9Y5G4 GATS-209ENST00000454084 1030 ntTSL 3 BASIC19.26■□□□□ 0.67
PCDHGA9Q9Y5G4 AC073648.6-201ENST00000641589 218 ntBASIC19.26■□□□□ 0.67
PCDHGA9Q9Y5G4 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC19.26■□□□□ 0.67
PCDHGA9Q9Y5G4 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PCDHGA9Q9Y5G4 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PCDHGA9Q9Y5G4 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
PCDHGA9Q9Y5G4 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
PCDHGA9Q9Y5G4 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PCDHGA9Q9Y5G4 AL121603.2-201ENST00000557373 2117 ntBASIC19.25■□□□□ 0.67
PCDHGA9Q9Y5G4 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC19.25■□□□□ 0.67
PCDHGA9Q9Y5G4 AC026310.3-201ENST00000625186 2373 ntBASIC19.25■□□□□ 0.67
PCDHGA9Q9Y5G4 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PCDHGA9Q9Y5G4 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PCDHGA9Q9Y5G4 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC19.25■□□□□ 0.67
PCDHGA9Q9Y5G4 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC19.25■□□□□ 0.67
PCDHGA9Q9Y5G4 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC19.25■□□□□ 0.67
PCDHGA9Q9Y5G4 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PCDHGA9Q9Y5G4 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC19.25■□□□□ 0.67
PCDHGA9Q9Y5G4 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC19.25■□□□□ 0.67
PCDHGA9Q9Y5G4 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC19.25■□□□□ 0.67
PCDHGA9Q9Y5G4 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC19.25■□□□□ 0.67
PCDHGA9Q9Y5G4 CDV3P1-201ENST00000471403 739 ntBASIC19.25■□□□□ 0.67
PCDHGA9Q9Y5G4 UNC93B4-201ENST00000505679 747 ntBASIC19.25■□□□□ 0.67
PCDHGA9Q9Y5G4 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC19.25■□□□□ 0.67
PCDHGA9Q9Y5G4 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC19.25■□□□□ 0.67
PCDHGA9Q9Y5G4 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PCDHGA9Q9Y5G4 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PCDHGA9Q9Y5G4 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PCDHGA9Q9Y5G4 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
PCDHGA9Q9Y5G4 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC19.25■□□□□ 0.67
PCDHGA9Q9Y5G4 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
PCDHGA9Q9Y5G4 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PCDHGA9Q9Y5G4 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
PCDHGA9Q9Y5G4 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
PCDHGA9Q9Y5G4 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
PCDHGA9Q9Y5G4 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
PCDHGA9Q9Y5G4 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PCDHGA9Q9Y5G4 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PCDHGA9Q9Y5G4 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PCDHGA9Q9Y5G4 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
PCDHGA9Q9Y5G4 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC19.24■□□□□ 0.67
PCDHGA9Q9Y5G4 NME6-213ENST00000451657 871 ntTSL 2 BASIC19.24■□□□□ 0.67
PCDHGA9Q9Y5G4 AC060766.5-201ENST00000590539 871 ntBASIC19.24■□□□□ 0.67
PCDHGA9Q9Y5G4 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC19.24■□□□□ 0.67
PCDHGA9Q9Y5G4 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PCDHGA9Q9Y5G4 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
PCDHGA9Q9Y5G4 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC19.24■□□□□ 0.67
PCDHGA9Q9Y5G4 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
PCDHGA9Q9Y5G4 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC19.23■□□□□ 0.67
PCDHGA9Q9Y5G4 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
PCDHGA9Q9Y5G4 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PCDHGA9Q9Y5G4 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PCDHGA9Q9Y5G4 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC19.23■□□□□ 0.67
PCDHGA9Q9Y5G4 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
PCDHGA9Q9Y5G4 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
PCDHGA9Q9Y5G4 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PCDHGA9Q9Y5G4 AC091799.1-201ENST00000422823 811 ntBASIC19.23■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms