Protein–RNA interactions for Protein: Q9Y5E6

PCDHB3, Protocadherin beta-3, humanhuman

Predictions only

Length 796 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB3Q9Y5E6 PARP1-210ENST00000629232 477 ntTSL 5 BASIC20.15■□□□□ 0.82
PCDHB3Q9Y5E6 TMEM191A-211ENST00000637163 1067 ntBASIC20.15■□□□□ 0.82
PCDHB3Q9Y5E6 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
PCDHB3Q9Y5E6 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
PCDHB3Q9Y5E6 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PCDHB3Q9Y5E6 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
PCDHB3Q9Y5E6 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PCDHB3Q9Y5E6 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PCDHB3Q9Y5E6 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PCDHB3Q9Y5E6 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC20.14■□□□□ 0.82
PCDHB3Q9Y5E6 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
PCDHB3Q9Y5E6 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
PCDHB3Q9Y5E6 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
PCDHB3Q9Y5E6 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
PCDHB3Q9Y5E6 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC20.14■□□□□ 0.81
PCDHB3Q9Y5E6 APTR-205ENST00000447009 902 ntTSL 2 BASIC20.14■□□□□ 0.81
PCDHB3Q9Y5E6 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC20.14■□□□□ 0.81
PCDHB3Q9Y5E6 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC20.14■□□□□ 0.81
PCDHB3Q9Y5E6 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
PCDHB3Q9Y5E6 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC20.14■□□□□ 0.81
PCDHB3Q9Y5E6 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC20.14■□□□□ 0.81
PCDHB3Q9Y5E6 AC010536.3-201ENST00000620306 533 ntBASIC20.14■□□□□ 0.81
PCDHB3Q9Y5E6 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
PCDHB3Q9Y5E6 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PCDHB3Q9Y5E6 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
PCDHB3Q9Y5E6 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PCDHB3Q9Y5E6 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC20.13■□□□□ 0.81
PCDHB3Q9Y5E6 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC20.13■□□□□ 0.81
PCDHB3Q9Y5E6 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PCDHB3Q9Y5E6 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PCDHB3Q9Y5E6 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC20.13■□□□□ 0.81
PCDHB3Q9Y5E6 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
PCDHB3Q9Y5E6 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC20.13■□□□□ 0.81
PCDHB3Q9Y5E6 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PCDHB3Q9Y5E6 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC20.13■□□□□ 0.81
PCDHB3Q9Y5E6 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
PCDHB3Q9Y5E6 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC20.13■□□□□ 0.81
PCDHB3Q9Y5E6 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC20.12■□□□□ 0.81
PCDHB3Q9Y5E6 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC20.12■□□□□ 0.81
PCDHB3Q9Y5E6 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
PCDHB3Q9Y5E6 AC092667.1-201ENST00000434301 2586 ntBASIC20.12■□□□□ 0.81
PCDHB3Q9Y5E6 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC20.12■□□□□ 0.81
PCDHB3Q9Y5E6 NAA20-201ENST00000310450 920 ntTSL 2 BASIC20.12■□□□□ 0.81
PCDHB3Q9Y5E6 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
PCDHB3Q9Y5E6 TSPY6P-201ENST00000448518 926 ntBASIC20.12■□□□□ 0.81
PCDHB3Q9Y5E6 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC20.12■□□□□ 0.81
PCDHB3Q9Y5E6 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
PCDHB3Q9Y5E6 RNF146-206ENST00000480444 843 ntTSL 2 BASIC20.12■□□□□ 0.81
PCDHB3Q9Y5E6 AC142086.2-201ENST00000569753 217 ntBASIC20.12■□□□□ 0.81
PCDHB3Q9Y5E6 AC008175.2-201ENST00000612840 297 ntBASIC20.12■□□□□ 0.81
PCDHB3Q9Y5E6 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC20.12■□□□□ 0.81
PCDHB3Q9Y5E6 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PCDHB3Q9Y5E6 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PCDHB3Q9Y5E6 DYM-203ENST00000442713 2147 ntTSL 2 BASIC20.12■□□□□ 0.81
PCDHB3Q9Y5E6 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PCDHB3Q9Y5E6 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC20.12■□□□□ 0.81
PCDHB3Q9Y5E6 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
PCDHB3Q9Y5E6 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC20.12■□□□□ 0.81
PCDHB3Q9Y5E6 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC20.11■□□□□ 0.81
PCDHB3Q9Y5E6 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC20.11■□□□□ 0.81
PCDHB3Q9Y5E6 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PCDHB3Q9Y5E6 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC20.11■□□□□ 0.81
PCDHB3Q9Y5E6 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
PCDHB3Q9Y5E6 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PCDHB3Q9Y5E6 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
PCDHB3Q9Y5E6 AC120498.10-201ENST00000621827 505 ntBASIC20.11■□□□□ 0.81
PCDHB3Q9Y5E6 PFKL-212ENST00000628044 129 ntTSL 3 BASIC20.11■□□□□ 0.81
PCDHB3Q9Y5E6 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PCDHB3Q9Y5E6 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
PCDHB3Q9Y5E6 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
PCDHB3Q9Y5E6 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PCDHB3Q9Y5E6 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC20.1■□□□□ 0.81
PCDHB3Q9Y5E6 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
PCDHB3Q9Y5E6 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
PCDHB3Q9Y5E6 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC20.1■□□□□ 0.81
PCDHB3Q9Y5E6 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
PCDHB3Q9Y5E6 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
PCDHB3Q9Y5E6 POU5F1P4-201ENST00000413175 1085 ntBASIC20.1■□□□□ 0.81
PCDHB3Q9Y5E6 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
PCDHB3Q9Y5E6 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC20.1■□□□□ 0.81
PCDHB3Q9Y5E6 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC20.1■□□□□ 0.81
PCDHB3Q9Y5E6 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC20.1■□□□□ 0.81
PCDHB3Q9Y5E6 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC20.1■□□□□ 0.81
PCDHB3Q9Y5E6 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC20.1■□□□□ 0.81
PCDHB3Q9Y5E6 OAS3-207ENST00000551007 998 ntTSL 2 BASIC20.1■□□□□ 0.81
PCDHB3Q9Y5E6 RGMA-211ENST00000557420 989 ntTSL 3 BASIC20.1■□□□□ 0.81
PCDHB3Q9Y5E6 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC20.1■□□□□ 0.81
PCDHB3Q9Y5E6 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC20.1■□□□□ 0.81
PCDHB3Q9Y5E6 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC20.1■□□□□ 0.81
PCDHB3Q9Y5E6 AL050303.2-201ENST00000619798 666 ntBASIC20.1■□□□□ 0.81
PCDHB3Q9Y5E6 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
PCDHB3Q9Y5E6 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
PCDHB3Q9Y5E6 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
PCDHB3Q9Y5E6 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
PCDHB3Q9Y5E6 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC20.1■□□□□ 0.81
PCDHB3Q9Y5E6 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
PCDHB3Q9Y5E6 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
PCDHB3Q9Y5E6 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
PCDHB3Q9Y5E6 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
PCDHB3Q9Y5E6 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC20.09■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms