Protein–RNA interactions for Protein: Q9Y5A7

NUB1, NEDD8 ultimate buster 1, humanhuman

Predictions only

Length 615 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUB1Q9Y5A7 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC22.41■■□□□ 1.18
NUB1Q9Y5A7 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
NUB1Q9Y5A7 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
NUB1Q9Y5A7 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC22.41■■□□□ 1.18
NUB1Q9Y5A7 PHB2-213ENST00000546111 858 ntTSL 2 BASIC22.41■■□□□ 1.18
NUB1Q9Y5A7 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC22.41■■□□□ 1.18
NUB1Q9Y5A7 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
NUB1Q9Y5A7 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
NUB1Q9Y5A7 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
NUB1Q9Y5A7 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
NUB1Q9Y5A7 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
NUB1Q9Y5A7 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC22.41■■□□□ 1.18
NUB1Q9Y5A7 PKD1P6-201ENST00000343738 4769 ntBASIC22.41■■□□□ 1.18
NUB1Q9Y5A7 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
NUB1Q9Y5A7 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC22.4■■□□□ 1.18
NUB1Q9Y5A7 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
NUB1Q9Y5A7 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC22.4■■□□□ 1.18
NUB1Q9Y5A7 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
NUB1Q9Y5A7 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC22.4■■□□□ 1.18
NUB1Q9Y5A7 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC22.4■■□□□ 1.18
NUB1Q9Y5A7 AC093787.1-201ENST00000450396 207 ntBASIC22.4■■□□□ 1.18
NUB1Q9Y5A7 PBX1-209ENST00000485769 834 ntTSL 2 BASIC22.4■■□□□ 1.18
NUB1Q9Y5A7 AL162412.1-201ENST00000567129 965 ntBASIC22.4■■□□□ 1.18
NUB1Q9Y5A7 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC22.4■■□□□ 1.18
NUB1Q9Y5A7 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC22.4■■□□□ 1.18
NUB1Q9Y5A7 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC22.4■■□□□ 1.18
NUB1Q9Y5A7 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
NUB1Q9Y5A7 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
NUB1Q9Y5A7 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC22.4■■□□□ 1.18
NUB1Q9Y5A7 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
NUB1Q9Y5A7 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC22.39■■□□□ 1.18
NUB1Q9Y5A7 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC22.39■■□□□ 1.18
NUB1Q9Y5A7 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC22.39■■□□□ 1.17
NUB1Q9Y5A7 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
NUB1Q9Y5A7 CD44-222ENST00000526025 1052 ntTSL 2 BASIC22.39■■□□□ 1.17
NUB1Q9Y5A7 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC22.39■■□□□ 1.17
NUB1Q9Y5A7 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC22.39■■□□□ 1.17
NUB1Q9Y5A7 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC22.39■■□□□ 1.17
NUB1Q9Y5A7 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC22.39■■□□□ 1.17
NUB1Q9Y5A7 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
NUB1Q9Y5A7 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC22.39■■□□□ 1.17
NUB1Q9Y5A7 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC22.39■■□□□ 1.17
NUB1Q9Y5A7 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC22.38■■□□□ 1.17
NUB1Q9Y5A7 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC22.38■■□□□ 1.17
NUB1Q9Y5A7 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC22.38■■□□□ 1.17
NUB1Q9Y5A7 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC22.38■■□□□ 1.17
NUB1Q9Y5A7 AL512625.2-201ENST00000417533 625 ntBASIC22.38■■□□□ 1.17
NUB1Q9Y5A7 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
NUB1Q9Y5A7 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC22.38■■□□□ 1.17
NUB1Q9Y5A7 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC22.38■■□□□ 1.17
NUB1Q9Y5A7 RGMA-211ENST00000557420 989 ntTSL 3 BASIC22.38■■□□□ 1.17
NUB1Q9Y5A7 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC22.38■■□□□ 1.17
NUB1Q9Y5A7 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC22.38■■□□□ 1.17
NUB1Q9Y5A7 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC22.38■■□□□ 1.17
NUB1Q9Y5A7 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC22.38■■□□□ 1.17
NUB1Q9Y5A7 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC22.38■■□□□ 1.17
NUB1Q9Y5A7 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
NUB1Q9Y5A7 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
NUB1Q9Y5A7 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC22.37■■□□□ 1.17
NUB1Q9Y5A7 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
NUB1Q9Y5A7 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
NUB1Q9Y5A7 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC22.37■■□□□ 1.17
NUB1Q9Y5A7 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC22.37■■□□□ 1.17
NUB1Q9Y5A7 AC133041.1-202ENST00000642053 222 ntBASIC22.37■■□□□ 1.17
NUB1Q9Y5A7 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC22.37■■□□□ 1.17
NUB1Q9Y5A7 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
NUB1Q9Y5A7 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC22.37■■□□□ 1.17
NUB1Q9Y5A7 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC22.37■■□□□ 1.17
NUB1Q9Y5A7 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC22.36■■□□□ 1.17
NUB1Q9Y5A7 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC22.36■■□□□ 1.17
NUB1Q9Y5A7 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC22.36■■□□□ 1.17
NUB1Q9Y5A7 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC22.36■■□□□ 1.17
NUB1Q9Y5A7 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
NUB1Q9Y5A7 MIPEPP3-201ENST00000412105 444 ntBASIC22.36■■□□□ 1.17
NUB1Q9Y5A7 AC069152.1-201ENST00000438030 544 ntBASIC22.36■■□□□ 1.17
NUB1Q9Y5A7 RARRES2P4-201ENST00000514074 484 ntBASIC22.36■■□□□ 1.17
NUB1Q9Y5A7 MIR4758-201ENST00000577688 71 ntBASIC22.36■■□□□ 1.17
NUB1Q9Y5A7 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC22.36■■□□□ 1.17
NUB1Q9Y5A7 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
NUB1Q9Y5A7 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
NUB1Q9Y5A7 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC22.35■■□□□ 1.17
NUB1Q9Y5A7 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
NUB1Q9Y5A7 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC22.35■■□□□ 1.17
NUB1Q9Y5A7 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
NUB1Q9Y5A7 AC091799.1-201ENST00000422823 811 ntBASIC22.35■■□□□ 1.17
NUB1Q9Y5A7 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC22.35■■□□□ 1.17
NUB1Q9Y5A7 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC22.35■■□□□ 1.17
NUB1Q9Y5A7 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC22.35■■□□□ 1.17
NUB1Q9Y5A7 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
NUB1Q9Y5A7 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC22.35■■□□□ 1.17
NUB1Q9Y5A7 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC22.35■■□□□ 1.17
NUB1Q9Y5A7 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
NUB1Q9Y5A7 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
NUB1Q9Y5A7 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC22.34■■□□□ 1.17
NUB1Q9Y5A7 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC22.34■■□□□ 1.17
NUB1Q9Y5A7 EFS-203ENST00000429593 2610 ntTSL 2 BASIC22.34■■□□□ 1.17
NUB1Q9Y5A7 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC22.34■■□□□ 1.17
NUB1Q9Y5A7 CDV3P1-201ENST00000471403 739 ntBASIC22.34■■□□□ 1.17
NUB1Q9Y5A7 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC22.34■■□□□ 1.17
NUB1Q9Y5A7 MARS-234ENST00000630571 216 ntTSL 5 BASIC22.34■■□□□ 1.17
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms