Protein–RNA interactions for Protein: Q9UQD0

SCN8A, Sodium channel protein type 8 subunit alpha, humanhuman

Predictions only

Length 1,980 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8AQ9UQD0 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC20.51■□□□□ 0.87
SCN8AQ9UQD0 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SCN8AQ9UQD0 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC20.51■□□□□ 0.87
SCN8AQ9UQD0 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SCN8AQ9UQD0 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC20.51■□□□□ 0.87
SCN8AQ9UQD0 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC20.51■□□□□ 0.87
SCN8AQ9UQD0 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC20.5■□□□□ 0.87
SCN8AQ9UQD0 SLC29A4P1-201ENST00000398760 971 ntBASIC20.5■□□□□ 0.87
SCN8AQ9UQD0 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
SCN8AQ9UQD0 MARS-234ENST00000630571 216 ntTSL 5 BASIC20.5■□□□□ 0.87
SCN8AQ9UQD0 MARS-235ENST00000630803 183 ntTSL 3 BASIC20.5■□□□□ 0.87
SCN8AQ9UQD0 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC20.5■□□□□ 0.87
SCN8AQ9UQD0 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC20.5■□□□□ 0.87
SCN8AQ9UQD0 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC20.5■□□□□ 0.87
SCN8AQ9UQD0 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
SCN8AQ9UQD0 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC20.5■□□□□ 0.87
SCN8AQ9UQD0 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SCN8AQ9UQD0 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
SCN8AQ9UQD0 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
SCN8AQ9UQD0 AC069152.1-201ENST00000438030 544 ntBASIC20.5■□□□□ 0.87
SCN8AQ9UQD0 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC20.5■□□□□ 0.87
SCN8AQ9UQD0 AC005181.1-201ENST00000604782 1256 ntBASIC20.5■□□□□ 0.87
SCN8AQ9UQD0 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC20.5■□□□□ 0.87
SCN8AQ9UQD0 MDK-213ENST00000617138 635 ntTSL 2 BASIC20.5■□□□□ 0.87
SCN8AQ9UQD0 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC20.5■□□□□ 0.87
SCN8AQ9UQD0 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SCN8AQ9UQD0 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC20.5■□□□□ 0.87
SCN8AQ9UQD0 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC20.5■□□□□ 0.87
SCN8AQ9UQD0 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SCN8AQ9UQD0 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SCN8AQ9UQD0 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC20.49■□□□□ 0.87
SCN8AQ9UQD0 PLK5-205ENST00000642079 1969 ntBASIC20.49■□□□□ 0.87
SCN8AQ9UQD0 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SCN8AQ9UQD0 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
SCN8AQ9UQD0 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC20.49■□□□□ 0.87
SCN8AQ9UQD0 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
SCN8AQ9UQD0 AL138781.1-201ENST00000566567 1274 ntBASIC20.49■□□□□ 0.87
SCN8AQ9UQD0 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC20.49■□□□□ 0.87
SCN8AQ9UQD0 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
SCN8AQ9UQD0 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
SCN8AQ9UQD0 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC20.49■□□□□ 0.87
SCN8AQ9UQD0 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SCN8AQ9UQD0 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
SCN8AQ9UQD0 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC20.48■□□□□ 0.87
SCN8AQ9UQD0 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC20.48■□□□□ 0.87
SCN8AQ9UQD0 TSPY6P-201ENST00000448518 926 ntBASIC20.48■□□□□ 0.87
SCN8AQ9UQD0 CDV3P1-201ENST00000471403 739 ntBASIC20.48■□□□□ 0.87
SCN8AQ9UQD0 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC20.48■□□□□ 0.87
SCN8AQ9UQD0 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC20.48■□□□□ 0.87
SCN8AQ9UQD0 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SCN8AQ9UQD0 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
SCN8AQ9UQD0 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
SCN8AQ9UQD0 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
SCN8AQ9UQD0 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC20.48■□□□□ 0.87
SCN8AQ9UQD0 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC20.48■□□□□ 0.87
SCN8AQ9UQD0 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
SCN8AQ9UQD0 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC20.48■□□□□ 0.87
SCN8AQ9UQD0 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC20.48■□□□□ 0.87
SCN8AQ9UQD0 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SCN8AQ9UQD0 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
SCN8AQ9UQD0 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
SCN8AQ9UQD0 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
SCN8AQ9UQD0 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
SCN8AQ9UQD0 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
SCN8AQ9UQD0 AL355472.2-201ENST00000422958 438 ntBASIC20.47■□□□□ 0.87
SCN8AQ9UQD0 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC20.47■□□□□ 0.87
SCN8AQ9UQD0 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC20.47■□□□□ 0.87
SCN8AQ9UQD0 AC133552.2-202ENST00000575694 574 ntBASIC20.47■□□□□ 0.87
SCN8AQ9UQD0 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC20.47■□□□□ 0.87
SCN8AQ9UQD0 AL591742.1-201ENST00000604433 565 ntBASIC20.47■□□□□ 0.87
SCN8AQ9UQD0 AC066615.1-201ENST00000640911 628 ntBASIC20.47■□□□□ 0.87
SCN8AQ9UQD0 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SCN8AQ9UQD0 AC010980.2-201ENST00000587099 1412 ntBASIC20.47■□□□□ 0.87
SCN8AQ9UQD0 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
SCN8AQ9UQD0 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SCN8AQ9UQD0 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
SCN8AQ9UQD0 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC20.47■□□□□ 0.87
SCN8AQ9UQD0 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC20.46■□□□□ 0.87
SCN8AQ9UQD0 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC20.46■□□□□ 0.87
SCN8AQ9UQD0 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC20.46■□□□□ 0.87
SCN8AQ9UQD0 AC069236.1-201ENST00000604339 616 ntBASIC20.46■□□□□ 0.87
SCN8AQ9UQD0 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SCN8AQ9UQD0 AC011484.1-201ENST00000377652 1995 ntBASIC20.46■□□□□ 0.87
SCN8AQ9UQD0 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SCN8AQ9UQD0 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
SCN8AQ9UQD0 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC20.46■□□□□ 0.87
SCN8AQ9UQD0 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
SCN8AQ9UQD0 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC20.46■□□□□ 0.87
SCN8AQ9UQD0 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SCN8AQ9UQD0 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC20.46■□□□□ 0.87
SCN8AQ9UQD0 CD99P1-205ENST00000527459 561 ntBASIC20.46■□□□□ 0.87
SCN8AQ9UQD0 OR10C1-204ENST00000622521 1039 ntBASIC20.46■□□□□ 0.87
SCN8AQ9UQD0 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC20.46■□□□□ 0.87
SCN8AQ9UQD0 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC20.46■□□□□ 0.87
SCN8AQ9UQD0 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC20.46■□□□□ 0.87
SCN8AQ9UQD0 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
SCN8AQ9UQD0 MKRN4P-201ENST00000444706 1521 ntBASIC20.46■□□□□ 0.87
SCN8AQ9UQD0 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC20.45■□□□□ 0.87
SCN8AQ9UQD0 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
SCN8AQ9UQD0 ERF-202ENST00000440177 2032 ntTSL 2 BASIC20.45■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms