Protein–RNA interactions for Protein: Q9UPN3

MACF1, Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5, humanhuman

Known RBP Predictions only

Length 7,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1Q9UPN3 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
MACF1Q9UPN3 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC8.62□□□□□ -1.03
MACF1Q9UPN3 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC8.62□□□□□ -1.03
MACF1Q9UPN3 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC8.62□□□□□ -1.03
MACF1Q9UPN3 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC8.62□□□□□ -1.03
MACF1Q9UPN3 AC120498.10-201ENST00000621827 505 ntBASIC8.62□□□□□ -1.03
MACF1Q9UPN3 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC8.62□□□□□ -1.03
MACF1Q9UPN3 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
MACF1Q9UPN3 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC8.62□□□□□ -1.03
MACF1Q9UPN3 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
MACF1Q9UPN3 PMS2P1-201ENST00000431037 1228 ntBASIC8.62□□□□□ -1.03
MACF1Q9UPN3 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC8.62□□□□□ -1.03
MACF1Q9UPN3 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
MACF1Q9UPN3 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
MACF1Q9UPN3 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC8.62□□□□□ -1.03
MACF1Q9UPN3 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC8.62□□□□□ -1.03
MACF1Q9UPN3 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC8.62□□□□□ -1.03
MACF1Q9UPN3 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
MACF1Q9UPN3 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC8.62□□□□□ -1.03
MACF1Q9UPN3 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC8.62□□□□□ -1.03
MACF1Q9UPN3 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
MACF1Q9UPN3 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
MACF1Q9UPN3 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
MACF1Q9UPN3 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC8.62□□□□□ -1.03
MACF1Q9UPN3 ECEL1P2-202ENST00000465689 757 ntBASIC8.62□□□□□ -1.03
MACF1Q9UPN3 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC8.62□□□□□ -1.03
MACF1Q9UPN3 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC8.61□□□□□ -1.03
MACF1Q9UPN3 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
MACF1Q9UPN3 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
MACF1Q9UPN3 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
MACF1Q9UPN3 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC8.61□□□□□ -1.03
MACF1Q9UPN3 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC8.61□□□□□ -1.03
MACF1Q9UPN3 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC8.61□□□□□ -1.03
MACF1Q9UPN3 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC8.61□□□□□ -1.03
MACF1Q9UPN3 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC8.61□□□□□ -1.03
MACF1Q9UPN3 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
MACF1Q9UPN3 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
MACF1Q9UPN3 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC8.61□□□□□ -1.03
MACF1Q9UPN3 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC8.61□□□□□ -1.03
MACF1Q9UPN3 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC8.61□□□□□ -1.03
MACF1Q9UPN3 AL121956.5-201ENST00000625261 221 ntBASIC8.61□□□□□ -1.03
MACF1Q9UPN3 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
MACF1Q9UPN3 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC8.61□□□□□ -1.03
MACF1Q9UPN3 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC8.61□□□□□ -1.03
MACF1Q9UPN3 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC8.61□□□□□ -1.03
MACF1Q9UPN3 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC8.61□□□□□ -1.03
MACF1Q9UPN3 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
MACF1Q9UPN3 PMS2P2-201ENST00000425039 1128 ntBASIC8.61□□□□□ -1.03
MACF1Q9UPN3 EMBP1-201ENST00000458200 901 ntBASIC8.61□□□□□ -1.03
MACF1Q9UPN3 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC8.61□□□□□ -1.03
MACF1Q9UPN3 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC8.61□□□□□ -1.03
MACF1Q9UPN3 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC8.61□□□□□ -1.03
MACF1Q9UPN3 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
MACF1Q9UPN3 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
MACF1Q9UPN3 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC8.6□□□□□ -1.03
MACF1Q9UPN3 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
MACF1Q9UPN3 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC8.6□□□□□ -1.03
MACF1Q9UPN3 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC8.6□□□□□ -1.03
MACF1Q9UPN3 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC8.6□□□□□ -1.03
MACF1Q9UPN3 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC8.6□□□□□ -1.03
MACF1Q9UPN3 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
MACF1Q9UPN3 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
MACF1Q9UPN3 COX11P1-201ENST00000489116 835 ntBASIC8.6□□□□□ -1.03
MACF1Q9UPN3 AL138966.2-201ENST00000621997 464 ntBASIC8.6□□□□□ -1.03
MACF1Q9UPN3 CLN6-221ENST00000637494 765 ntTSL 5 BASIC8.6□□□□□ -1.03
MACF1Q9UPN3 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC8.6□□□□□ -1.03
MACF1Q9UPN3 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
MACF1Q9UPN3 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC8.6□□□□□ -1.03
MACF1Q9UPN3 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
MACF1Q9UPN3 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC8.6□□□□□ -1.03
MACF1Q9UPN3 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC8.6□□□□□ -1.03
MACF1Q9UPN3 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC8.6□□□□□ -1.03
MACF1Q9UPN3 MIR6089-201ENST00000616698 64 ntBASIC8.6□□□□□ -1.03
MACF1Q9UPN3 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC8.6□□□□□ -1.03
MACF1Q9UPN3 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
MACF1Q9UPN3 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
MACF1Q9UPN3 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC8.6□□□□□ -1.03
MACF1Q9UPN3 CALY-203ENST00000368558 825 ntTSL 5 BASIC8.6□□□□□ -1.03
MACF1Q9UPN3 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC8.6□□□□□ -1.03
MACF1Q9UPN3 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC8.6□□□□□ -1.03
MACF1Q9UPN3 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC8.6□□□□□ -1.03
MACF1Q9UPN3 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC8.6□□□□□ -1.03
MACF1Q9UPN3 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC8.6□□□□□ -1.03
MACF1Q9UPN3 TSPY5P-201ENST00000426936 936 ntBASIC8.6□□□□□ -1.03
MACF1Q9UPN3 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
MACF1Q9UPN3 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
MACF1Q9UPN3 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC8.6□□□□□ -1.03
MACF1Q9UPN3 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC8.6□□□□□ -1.03
MACF1Q9UPN3 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
MACF1Q9UPN3 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
MACF1Q9UPN3 TEX30-205ENST00000376029 959 ntTSL 2 BASIC8.6□□□□□ -1.03
MACF1Q9UPN3 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
MACF1Q9UPN3 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
MACF1Q9UPN3 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC8.59□□□□□ -1.03
MACF1Q9UPN3 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC8.59□□□□□ -1.03
MACF1Q9UPN3 KRT16P5-201ENST00000455284 522 ntBASIC8.59□□□□□ -1.03
MACF1Q9UPN3 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
MACF1Q9UPN3 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC8.59□□□□□ -1.03
MACF1Q9UPN3 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
MACF1Q9UPN3 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms