Protein–RNA interactions for Protein: Q9UKV5

AMFR, E3 ubiquitin-protein ligase AMFR, humanhuman

Predictions only

Length 643 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMFRQ9UKV5 AL355001.2-201ENST00000620617 1191 ntBASIC21.75■■□□□ 1.07
AMFRQ9UKV5 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
AMFRQ9UKV5 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
AMFRQ9UKV5 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
AMFRQ9UKV5 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC21.75■■□□□ 1.07
AMFRQ9UKV5 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC21.75■■□□□ 1.07
AMFRQ9UKV5 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC21.75■■□□□ 1.07
AMFRQ9UKV5 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC21.74■■□□□ 1.07
AMFRQ9UKV5 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
AMFRQ9UKV5 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
AMFRQ9UKV5 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
AMFRQ9UKV5 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
AMFRQ9UKV5 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC21.74■■□□□ 1.07
AMFRQ9UKV5 AL512408.1-201ENST00000569378 2000 ntBASIC21.74■■□□□ 1.07
AMFRQ9UKV5 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC21.74■■□□□ 1.07
AMFRQ9UKV5 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC21.74■■□□□ 1.07
AMFRQ9UKV5 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
AMFRQ9UKV5 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC21.74■■□□□ 1.07
AMFRQ9UKV5 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC21.74■■□□□ 1.07
AMFRQ9UKV5 AC012414.1-201ENST00000556676 535 ntBASIC21.74■■□□□ 1.07
AMFRQ9UKV5 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
AMFRQ9UKV5 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
AMFRQ9UKV5 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC21.74■■□□□ 1.07
AMFRQ9UKV5 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC21.74■■□□□ 1.07
AMFRQ9UKV5 AL162377.1-201ENST00000618844 1793 ntBASIC21.74■■□□□ 1.07
AMFRQ9UKV5 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC21.73■■□□□ 1.07
AMFRQ9UKV5 ME2-218ENST00000640965 2476 ntTSL 5 BASIC21.73■■□□□ 1.07
AMFRQ9UKV5 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
AMFRQ9UKV5 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC21.73■■□□□ 1.07
AMFRQ9UKV5 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC21.73■■□□□ 1.07
AMFRQ9UKV5 EBPL-204ENST00000378272 766 ntTSL 3 BASIC21.73■■□□□ 1.07
AMFRQ9UKV5 MIR939-201ENST00000401314 82 ntBASIC21.73■■□□□ 1.07
AMFRQ9UKV5 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC21.73■■□□□ 1.07
AMFRQ9UKV5 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC21.73■■□□□ 1.07
AMFRQ9UKV5 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
AMFRQ9UKV5 AF213884.3-201ENST00000563833 479 ntBASIC21.73■■□□□ 1.07
AMFRQ9UKV5 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC21.73■■□□□ 1.07
AMFRQ9UKV5 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
AMFRQ9UKV5 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC21.73■■□□□ 1.07
AMFRQ9UKV5 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC21.73■■□□□ 1.07
AMFRQ9UKV5 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC21.73■■□□□ 1.07
AMFRQ9UKV5 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
AMFRQ9UKV5 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
AMFRQ9UKV5 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
AMFRQ9UKV5 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
AMFRQ9UKV5 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
AMFRQ9UKV5 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
AMFRQ9UKV5 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
AMFRQ9UKV5 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC21.72■■□□□ 1.07
AMFRQ9UKV5 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
AMFRQ9UKV5 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
AMFRQ9UKV5 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC21.72■■□□□ 1.07
AMFRQ9UKV5 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
AMFRQ9UKV5 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
AMFRQ9UKV5 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC21.72■■□□□ 1.07
AMFRQ9UKV5 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
AMFRQ9UKV5 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC21.72■■□□□ 1.07
AMFRQ9UKV5 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
AMFRQ9UKV5 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC21.72■■□□□ 1.07
AMFRQ9UKV5 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
AMFRQ9UKV5 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
AMFRQ9UKV5 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC21.71■■□□□ 1.07
AMFRQ9UKV5 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
AMFRQ9UKV5 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
AMFRQ9UKV5 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
AMFRQ9UKV5 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
AMFRQ9UKV5 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
AMFRQ9UKV5 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC21.71■■□□□ 1.07
AMFRQ9UKV5 AC091305.1-201ENST00000479476 895 ntBASIC21.71■■□□□ 1.07
AMFRQ9UKV5 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC21.71■■□□□ 1.07
AMFRQ9UKV5 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
AMFRQ9UKV5 CPT2-209ENST00000636935 803 ntTSL 5 BASIC21.71■■□□□ 1.07
AMFRQ9UKV5 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC21.71■■□□□ 1.07
AMFRQ9UKV5 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
AMFRQ9UKV5 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
AMFRQ9UKV5 STAC-204ENST00000457375 1366 ntTSL 2 BASIC21.71■■□□□ 1.07
AMFRQ9UKV5 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC21.71■■□□□ 1.07
AMFRQ9UKV5 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC21.71■■□□□ 1.07
AMFRQ9UKV5 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC21.71■■□□□ 1.07
AMFRQ9UKV5 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
AMFRQ9UKV5 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
AMFRQ9UKV5 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
AMFRQ9UKV5 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
AMFRQ9UKV5 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
AMFRQ9UKV5 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
AMFRQ9UKV5 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
AMFRQ9UKV5 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
AMFRQ9UKV5 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC21.7■■□□□ 1.06
AMFRQ9UKV5 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC21.7■■□□□ 1.06
AMFRQ9UKV5 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC21.7■■□□□ 1.06
AMFRQ9UKV5 TPRG1LP1-201ENST00000598702 760 ntBASIC21.7■■□□□ 1.06
AMFRQ9UKV5 AC008175.2-201ENST00000612840 297 ntBASIC21.7■■□□□ 1.06
AMFRQ9UKV5 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC21.7■■□□□ 1.06
AMFRQ9UKV5 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
AMFRQ9UKV5 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
AMFRQ9UKV5 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
AMFRQ9UKV5 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
AMFRQ9UKV5 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC21.7■■□□□ 1.06
AMFRQ9UKV5 USP39-204ENST00000409766 2033 ntTSL 2 BASIC21.7■■□□□ 1.06
AMFRQ9UKV5 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms