Protein–RNA interactions for Protein: Q9UKN5

PRDM4, PR domain zinc finger protein 4, humanhuman

Predictions only

Length 801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM4Q9UKN5 AC139795.1-202ENST00000500444 432 ntBASIC21.27■■□□□ 1
PRDM4Q9UKN5 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC21.27■■□□□ 1
PRDM4Q9UKN5 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
PRDM4Q9UKN5 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
PRDM4Q9UKN5 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC21.27■■□□□ 1
PRDM4Q9UKN5 NOC2LP2-201ENST00000407594 1944 ntBASIC21.27■■□□□ 1
PRDM4Q9UKN5 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC21.27■■□□□ 1
PRDM4Q9UKN5 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
PRDM4Q9UKN5 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
PRDM4Q9UKN5 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC21.27■□□□□ 0.99
PRDM4Q9UKN5 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC21.27■□□□□ 0.99
PRDM4Q9UKN5 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC21.27■□□□□ 0.99
PRDM4Q9UKN5 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
PRDM4Q9UKN5 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
PRDM4Q9UKN5 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
PRDM4Q9UKN5 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
PRDM4Q9UKN5 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
PRDM4Q9UKN5 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
PRDM4Q9UKN5 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC21.26■□□□□ 0.99
PRDM4Q9UKN5 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
PRDM4Q9UKN5 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
PRDM4Q9UKN5 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
PRDM4Q9UKN5 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC21.26■□□□□ 0.99
PRDM4Q9UKN5 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
PRDM4Q9UKN5 AC068880.1-201ENST00000507289 2297 ntBASIC21.26■□□□□ 0.99
PRDM4Q9UKN5 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC21.26■□□□□ 0.99
PRDM4Q9UKN5 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
PRDM4Q9UKN5 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC21.26■□□□□ 0.99
PRDM4Q9UKN5 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
PRDM4Q9UKN5 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
PRDM4Q9UKN5 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
PRDM4Q9UKN5 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
PRDM4Q9UKN5 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC21.25■□□□□ 0.99
PRDM4Q9UKN5 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC21.25■□□□□ 0.99
PRDM4Q9UKN5 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC21.25■□□□□ 0.99
PRDM4Q9UKN5 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC21.25■□□□□ 0.99
PRDM4Q9UKN5 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC21.25■□□□□ 0.99
PRDM4Q9UKN5 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
PRDM4Q9UKN5 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
PRDM4Q9UKN5 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
PRDM4Q9UKN5 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
PRDM4Q9UKN5 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
PRDM4Q9UKN5 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
PRDM4Q9UKN5 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC21.25■□□□□ 0.99
PRDM4Q9UKN5 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC21.25■□□□□ 0.99
PRDM4Q9UKN5 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
PRDM4Q9UKN5 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC21.25■□□□□ 0.99
PRDM4Q9UKN5 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
PRDM4Q9UKN5 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
PRDM4Q9UKN5 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
PRDM4Q9UKN5 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
PRDM4Q9UKN5 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC21.24■□□□□ 0.99
PRDM4Q9UKN5 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
PRDM4Q9UKN5 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
PRDM4Q9UKN5 AC004987.1-201ENST00000428627 508 ntBASIC21.24■□□□□ 0.99
PRDM4Q9UKN5 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
PRDM4Q9UKN5 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
PRDM4Q9UKN5 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC21.24■□□□□ 0.99
PRDM4Q9UKN5 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
PRDM4Q9UKN5 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC21.24■□□□□ 0.99
PRDM4Q9UKN5 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
PRDM4Q9UKN5 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC21.24■□□□□ 0.99
PRDM4Q9UKN5 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
PRDM4Q9UKN5 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
PRDM4Q9UKN5 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC21.23■□□□□ 0.99
PRDM4Q9UKN5 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
PRDM4Q9UKN5 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC21.23■□□□□ 0.99
PRDM4Q9UKN5 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
PRDM4Q9UKN5 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
PRDM4Q9UKN5 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC21.23■□□□□ 0.99
PRDM4Q9UKN5 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
PRDM4Q9UKN5 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
PRDM4Q9UKN5 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
PRDM4Q9UKN5 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
PRDM4Q9UKN5 AC012354.3-201ENST00000623734 483 ntBASIC21.23■□□□□ 0.99
PRDM4Q9UKN5 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
PRDM4Q9UKN5 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC21.23■□□□□ 0.99
PRDM4Q9UKN5 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
PRDM4Q9UKN5 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
PRDM4Q9UKN5 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
PRDM4Q9UKN5 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
PRDM4Q9UKN5 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC21.22■□□□□ 0.99
PRDM4Q9UKN5 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC21.22■□□□□ 0.99
PRDM4Q9UKN5 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
PRDM4Q9UKN5 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
PRDM4Q9UKN5 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC21.22■□□□□ 0.99
PRDM4Q9UKN5 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
PRDM4Q9UKN5 CEP83-AS1-201ENST00000623122 2482 ntBASIC21.22■□□□□ 0.99
PRDM4Q9UKN5 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
PRDM4Q9UKN5 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
PRDM4Q9UKN5 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
PRDM4Q9UKN5 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
PRDM4Q9UKN5 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
PRDM4Q9UKN5 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC21.21■□□□□ 0.99
PRDM4Q9UKN5 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
PRDM4Q9UKN5 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
PRDM4Q9UKN5 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC21.21■□□□□ 0.99
PRDM4Q9UKN5 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC21.21■□□□□ 0.99
PRDM4Q9UKN5 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC21.21■□□□□ 0.99
PRDM4Q9UKN5 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC21.21■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms