Protein–RNA interactions for Protein: Q9UBX1

CTSF, Cathepsin F, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSFQ9UBX1 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CTSFQ9UBX1 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
CTSFQ9UBX1 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CTSFQ9UBX1 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CTSFQ9UBX1 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
CTSFQ9UBX1 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CTSFQ9UBX1 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CTSFQ9UBX1 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC19.43■□□□□ 0.7
CTSFQ9UBX1 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC19.43■□□□□ 0.7
CTSFQ9UBX1 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC19.43■□□□□ 0.7
CTSFQ9UBX1 TSPY20P-201ENST00000450910 630 ntBASIC19.43■□□□□ 0.7
CTSFQ9UBX1 OR2A1-AS1-201ENST00000462305 773 ntBASIC19.43■□□□□ 0.7
CTSFQ9UBX1 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC19.43■□□□□ 0.7
CTSFQ9UBX1 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
CTSFQ9UBX1 AC091874.3-201ENST00000512672 1195 ntBASIC19.43■□□□□ 0.7
CTSFQ9UBX1 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC19.43■□□□□ 0.7
CTSFQ9UBX1 AC100791.3-201ENST00000617619 330 ntBASIC19.43■□□□□ 0.7
CTSFQ9UBX1 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC19.43■□□□□ 0.7
CTSFQ9UBX1 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
CTSFQ9UBX1 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CTSFQ9UBX1 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
CTSFQ9UBX1 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC19.43■□□□□ 0.7
CTSFQ9UBX1 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CTSFQ9UBX1 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
CTSFQ9UBX1 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CTSFQ9UBX1 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CTSFQ9UBX1 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CTSFQ9UBX1 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC19.42■□□□□ 0.7
CTSFQ9UBX1 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
CTSFQ9UBX1 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CTSFQ9UBX1 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CTSFQ9UBX1 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC19.42■□□□□ 0.7
CTSFQ9UBX1 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CTSFQ9UBX1 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CTSFQ9UBX1 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC19.42■□□□□ 0.7
CTSFQ9UBX1 MCRIP2P1-201ENST00000394346 511 ntBASIC19.42■□□□□ 0.7
CTSFQ9UBX1 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CTSFQ9UBX1 SERPINH1P1-201ENST00000419794 1249 ntBASIC19.42■□□□□ 0.7
CTSFQ9UBX1 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC19.42■□□□□ 0.7
CTSFQ9UBX1 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC19.42■□□□□ 0.7
CTSFQ9UBX1 RNA5SP413-201ENST00000516373 109 ntBASIC19.42■□□□□ 0.7
CTSFQ9UBX1 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CTSFQ9UBX1 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC19.42■□□□□ 0.7
CTSFQ9UBX1 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC19.42■□□□□ 0.7
CTSFQ9UBX1 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CTSFQ9UBX1 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CTSFQ9UBX1 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC19.42■□□□□ 0.7
CTSFQ9UBX1 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
CTSFQ9UBX1 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
CTSFQ9UBX1 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CTSFQ9UBX1 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CTSFQ9UBX1 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CTSFQ9UBX1 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
CTSFQ9UBX1 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CTSFQ9UBX1 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CTSFQ9UBX1 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CTSFQ9UBX1 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CTSFQ9UBX1 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC19.41■□□□□ 0.7
CTSFQ9UBX1 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CTSFQ9UBX1 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC19.41■□□□□ 0.7
CTSFQ9UBX1 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CTSFQ9UBX1 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CTSFQ9UBX1 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CTSFQ9UBX1 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
CTSFQ9UBX1 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC19.41■□□□□ 0.7
CTSFQ9UBX1 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
CTSFQ9UBX1 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CTSFQ9UBX1 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC19.41■□□□□ 0.7
CTSFQ9UBX1 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
CTSFQ9UBX1 EXOC3-AS1-202ENST00000623673 1663 ntBASIC19.41■□□□□ 0.7
CTSFQ9UBX1 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
CTSFQ9UBX1 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC19.41■□□□□ 0.7
CTSFQ9UBX1 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CTSFQ9UBX1 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
CTSFQ9UBX1 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
CTSFQ9UBX1 AC097658.1-201ENST00000475555 843 ntBASIC19.41■□□□□ 0.7
CTSFQ9UBX1 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC19.41■□□□□ 0.7
CTSFQ9UBX1 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC19.41■□□□□ 0.7
CTSFQ9UBX1 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CTSFQ9UBX1 TBCB-214ENST00000629269 413 ntTSL 5 BASIC19.41■□□□□ 0.7
CTSFQ9UBX1 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CTSFQ9UBX1 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CTSFQ9UBX1 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC19.41■□□□□ 0.7
CTSFQ9UBX1 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
CTSFQ9UBX1 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CTSFQ9UBX1 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CTSFQ9UBX1 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CTSFQ9UBX1 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CTSFQ9UBX1 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CTSFQ9UBX1 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
CTSFQ9UBX1 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
CTSFQ9UBX1 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CTSFQ9UBX1 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
CTSFQ9UBX1 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC19.4■□□□□ 0.7
CTSFQ9UBX1 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CTSFQ9UBX1 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC19.4■□□□□ 0.7
CTSFQ9UBX1 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC19.4■□□□□ 0.7
CTSFQ9UBX1 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CTSFQ9UBX1 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC19.4■□□□□ 0.7
CTSFQ9UBX1 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC19.4■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms