Protein–RNA interactions for Protein: Q9UBI1

COMMD3, COMM domain-containing protein 3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3Q9UBI1 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC18.12■□□□□ 0.49
COMMD3Q9UBI1 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
COMMD3Q9UBI1 NARF-205ENST00000412079 1760 ntTSL 5 BASIC18.12■□□□□ 0.49
COMMD3Q9UBI1 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC18.11■□□□□ 0.49
COMMD3Q9UBI1 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
COMMD3Q9UBI1 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
COMMD3Q9UBI1 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
COMMD3Q9UBI1 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
COMMD3Q9UBI1 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC18.11■□□□□ 0.49
COMMD3Q9UBI1 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC18.11■□□□□ 0.49
COMMD3Q9UBI1 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC18.11■□□□□ 0.49
COMMD3Q9UBI1 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC18.11■□□□□ 0.49
COMMD3Q9UBI1 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
COMMD3Q9UBI1 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
COMMD3Q9UBI1 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
COMMD3Q9UBI1 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
COMMD3Q9UBI1 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
COMMD3Q9UBI1 ATP5G2P3-201ENST00000429083 425 ntBASIC18.11■□□□□ 0.49
COMMD3Q9UBI1 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
COMMD3Q9UBI1 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
COMMD3Q9UBI1 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
COMMD3Q9UBI1 GTSE1-AS1-202ENST00000623117 1518 ntBASIC18.11■□□□□ 0.49
COMMD3Q9UBI1 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
COMMD3Q9UBI1 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC18.11■□□□□ 0.49
COMMD3Q9UBI1 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
COMMD3Q9UBI1 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
COMMD3Q9UBI1 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
COMMD3Q9UBI1 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
COMMD3Q9UBI1 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
COMMD3Q9UBI1 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
COMMD3Q9UBI1 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
COMMD3Q9UBI1 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
COMMD3Q9UBI1 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
COMMD3Q9UBI1 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
COMMD3Q9UBI1 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
COMMD3Q9UBI1 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
COMMD3Q9UBI1 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
COMMD3Q9UBI1 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC18.1■□□□□ 0.49
COMMD3Q9UBI1 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC18.1■□□□□ 0.49
COMMD3Q9UBI1 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
COMMD3Q9UBI1 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
COMMD3Q9UBI1 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
COMMD3Q9UBI1 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
COMMD3Q9UBI1 AC021242.3-201ENST00000607598 1377 ntBASIC18.1■□□□□ 0.49
COMMD3Q9UBI1 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
COMMD3Q9UBI1 AC103724.3-201ENST00000564481 992 ntBASIC18.1■□□□□ 0.49
COMMD3Q9UBI1 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC18.1■□□□□ 0.49
COMMD3Q9UBI1 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
COMMD3Q9UBI1 AP000974.1-201ENST00000623909 2387 ntBASIC18.1■□□□□ 0.49
COMMD3Q9UBI1 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC18.1■□□□□ 0.49
COMMD3Q9UBI1 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
COMMD3Q9UBI1 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
COMMD3Q9UBI1 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
COMMD3Q9UBI1 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC18.09■□□□□ 0.49
COMMD3Q9UBI1 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC18.09■□□□□ 0.49
COMMD3Q9UBI1 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC18.09■□□□□ 0.49
COMMD3Q9UBI1 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC18.09■□□□□ 0.49
COMMD3Q9UBI1 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC18.09■□□□□ 0.49
COMMD3Q9UBI1 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC18.09■□□□□ 0.49
COMMD3Q9UBI1 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC18.09■□□□□ 0.49
COMMD3Q9UBI1 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
COMMD3Q9UBI1 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC18.09■□□□□ 0.49
COMMD3Q9UBI1 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
COMMD3Q9UBI1 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
COMMD3Q9UBI1 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
COMMD3Q9UBI1 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
COMMD3Q9UBI1 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
COMMD3Q9UBI1 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
COMMD3Q9UBI1 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
COMMD3Q9UBI1 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
COMMD3Q9UBI1 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
COMMD3Q9UBI1 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
COMMD3Q9UBI1 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC18.09■□□□□ 0.49
COMMD3Q9UBI1 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
COMMD3Q9UBI1 STX5-203ENST00000394690 1568 ntTSL 5 BASIC18.08■□□□□ 0.49
COMMD3Q9UBI1 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.49
COMMD3Q9UBI1 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC18.08■□□□□ 0.49
COMMD3Q9UBI1 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
COMMD3Q9UBI1 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC18.08■□□□□ 0.49
COMMD3Q9UBI1 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
COMMD3Q9UBI1 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC18.08■□□□□ 0.48
COMMD3Q9UBI1 AC010141.3-201ENST00000456659 717 ntBASIC18.08■□□□□ 0.48
COMMD3Q9UBI1 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC18.08■□□□□ 0.48
COMMD3Q9UBI1 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
COMMD3Q9UBI1 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
COMMD3Q9UBI1 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC18.08■□□□□ 0.48
COMMD3Q9UBI1 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
COMMD3Q9UBI1 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
COMMD3Q9UBI1 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
COMMD3Q9UBI1 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
COMMD3Q9UBI1 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
COMMD3Q9UBI1 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
COMMD3Q9UBI1 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC18.07■□□□□ 0.48
COMMD3Q9UBI1 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
COMMD3Q9UBI1 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
COMMD3Q9UBI1 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC18.07■□□□□ 0.48
COMMD3Q9UBI1 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
COMMD3Q9UBI1 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
COMMD3Q9UBI1 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC18.07■□□□□ 0.48
COMMD3Q9UBI1 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms