Protein–RNA interactions for Protein: Q9P2I0

CPSF2, Cleavage and polyadenylation specificity factor subunit 2, humanhuman

Known RBP Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2Q9P2I0 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CPSF2Q9P2I0 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CPSF2Q9P2I0 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CPSF2Q9P2I0 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CPSF2Q9P2I0 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CPSF2Q9P2I0 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC20.68■□□□□ 0.9
CPSF2Q9P2I0 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
CPSF2Q9P2I0 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CPSF2Q9P2I0 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CPSF2Q9P2I0 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
CPSF2Q9P2I0 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC20.68■□□□□ 0.9
CPSF2Q9P2I0 PEMT-206ENST00000435340 960 ntTSL 5 BASIC20.68■□□□□ 0.9
CPSF2Q9P2I0 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CPSF2Q9P2I0 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC20.68■□□□□ 0.9
CPSF2Q9P2I0 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC20.68■□□□□ 0.9
CPSF2Q9P2I0 AC105233.4-201ENST00000642045 216 ntBASIC20.68■□□□□ 0.9
CPSF2Q9P2I0 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CPSF2Q9P2I0 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC20.68■□□□□ 0.9
CPSF2Q9P2I0 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC20.68■□□□□ 0.9
CPSF2Q9P2I0 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CPSF2Q9P2I0 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
CPSF2Q9P2I0 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
CPSF2Q9P2I0 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CPSF2Q9P2I0 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
CPSF2Q9P2I0 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC20.67■□□□□ 0.9
CPSF2Q9P2I0 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC20.67■□□□□ 0.9
CPSF2Q9P2I0 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CPSF2Q9P2I0 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CPSF2Q9P2I0 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CPSF2Q9P2I0 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CPSF2Q9P2I0 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC20.67■□□□□ 0.9
CPSF2Q9P2I0 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC20.67■□□□□ 0.9
CPSF2Q9P2I0 AC027682.1-201ENST00000562846 899 ntBASIC20.67■□□□□ 0.9
CPSF2Q9P2I0 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC20.67■□□□□ 0.9
CPSF2Q9P2I0 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CPSF2Q9P2I0 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
CPSF2Q9P2I0 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CPSF2Q9P2I0 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
CPSF2Q9P2I0 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CPSF2Q9P2I0 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
CPSF2Q9P2I0 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
CPSF2Q9P2I0 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CPSF2Q9P2I0 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CPSF2Q9P2I0 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CPSF2Q9P2I0 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CPSF2Q9P2I0 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CPSF2Q9P2I0 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
CPSF2Q9P2I0 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CPSF2Q9P2I0 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CPSF2Q9P2I0 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
CPSF2Q9P2I0 LHPP-203ENST00000392757 840 ntTSL 3 BASIC20.66■□□□□ 0.9
CPSF2Q9P2I0 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC20.66■□□□□ 0.9
CPSF2Q9P2I0 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC20.66■□□□□ 0.9
CPSF2Q9P2I0 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC20.66■□□□□ 0.9
CPSF2Q9P2I0 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC20.66■□□□□ 0.9
CPSF2Q9P2I0 MPST-208ENST00000628507 698 ntTSL 5 BASIC20.66■□□□□ 0.9
CPSF2Q9P2I0 AC009237.3-201ENST00000393279 1427 ntBASIC20.66■□□□□ 0.9
CPSF2Q9P2I0 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CPSF2Q9P2I0 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
CPSF2Q9P2I0 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
CPSF2Q9P2I0 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CPSF2Q9P2I0 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CPSF2Q9P2I0 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CPSF2Q9P2I0 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CPSF2Q9P2I0 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC20.66■□□□□ 0.9
CPSF2Q9P2I0 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
CPSF2Q9P2I0 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC20.66■□□□□ 0.9
CPSF2Q9P2I0 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC20.66■□□□□ 0.9
CPSF2Q9P2I0 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CPSF2Q9P2I0 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CPSF2Q9P2I0 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC20.65■□□□□ 0.9
CPSF2Q9P2I0 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CPSF2Q9P2I0 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CPSF2Q9P2I0 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
CPSF2Q9P2I0 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC20.65■□□□□ 0.9
CPSF2Q9P2I0 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
CPSF2Q9P2I0 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC20.65■□□□□ 0.9
CPSF2Q9P2I0 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CPSF2Q9P2I0 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC20.65■□□□□ 0.9
CPSF2Q9P2I0 AC055733.4-201ENST00000638462 1354 ntBASIC20.65■□□□□ 0.9
CPSF2Q9P2I0 MAG-206ENST00000597035 542 ntTSL 4 BASIC20.65■□□□□ 0.9
CPSF2Q9P2I0 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC20.65■□□□□ 0.9
CPSF2Q9P2I0 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
CPSF2Q9P2I0 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CPSF2Q9P2I0 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC20.65■□□□□ 0.9
CPSF2Q9P2I0 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
CPSF2Q9P2I0 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
CPSF2Q9P2I0 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
CPSF2Q9P2I0 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC20.64■□□□□ 0.9
CPSF2Q9P2I0 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
CPSF2Q9P2I0 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
CPSF2Q9P2I0 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
CPSF2Q9P2I0 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
CPSF2Q9P2I0 AC073314.1-201ENST00000568729 2216 ntBASIC20.64■□□□□ 0.89
CPSF2Q9P2I0 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CPSF2Q9P2I0 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CPSF2Q9P2I0 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CPSF2Q9P2I0 AP001330.3-201ENST00000520123 633 ntBASIC20.64■□□□□ 0.89
CPSF2Q9P2I0 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC20.64■□□□□ 0.89
CPSF2Q9P2I0 AC106739.1-201ENST00000617035 715 ntBASIC20.64■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms