Protein–RNA interactions for Protein: Q9NZQ3

NCKIPSD, NCK-interacting protein with SH3 domain, humanhuman

Predictions only

Length 722 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSDQ9NZQ3 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
NCKIPSDQ9NZQ3 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
NCKIPSDQ9NZQ3 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
NCKIPSDQ9NZQ3 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
NCKIPSDQ9NZQ3 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC20.79■□□□□ 0.92
NCKIPSDQ9NZQ3 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC20.79■□□□□ 0.92
NCKIPSDQ9NZQ3 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC20.79■□□□□ 0.92
NCKIPSDQ9NZQ3 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
NCKIPSDQ9NZQ3 RGMA-211ENST00000557420 989 ntTSL 3 BASIC20.79■□□□□ 0.92
NCKIPSDQ9NZQ3 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC20.79■□□□□ 0.92
NCKIPSDQ9NZQ3 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
NCKIPSDQ9NZQ3 AL049796.1-201ENST00000565336 1766 ntBASIC20.79■□□□□ 0.92
NCKIPSDQ9NZQ3 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
NCKIPSDQ9NZQ3 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
NCKIPSDQ9NZQ3 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
NCKIPSDQ9NZQ3 AP006587.3-201ENST00000525742 1516 ntBASIC20.78■□□□□ 0.92
NCKIPSDQ9NZQ3 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC20.78■□□□□ 0.92
NCKIPSDQ9NZQ3 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
NCKIPSDQ9NZQ3 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
NCKIPSDQ9NZQ3 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
NCKIPSDQ9NZQ3 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
NCKIPSDQ9NZQ3 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC20.78■□□□□ 0.92
NCKIPSDQ9NZQ3 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
NCKIPSDQ9NZQ3 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC20.78■□□□□ 0.92
NCKIPSDQ9NZQ3 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC20.78■□□□□ 0.92
NCKIPSDQ9NZQ3 ABHD17AP1-201ENST00000358206 933 ntBASIC20.78■□□□□ 0.92
NCKIPSDQ9NZQ3 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
NCKIPSDQ9NZQ3 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC20.78■□□□□ 0.92
NCKIPSDQ9NZQ3 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
NCKIPSDQ9NZQ3 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC20.78■□□□□ 0.92
NCKIPSDQ9NZQ3 AC133552.2-202ENST00000575694 574 ntBASIC20.78■□□□□ 0.92
NCKIPSDQ9NZQ3 AC013268.1-206ENST00000638368 961 ntBASIC20.78■□□□□ 0.92
NCKIPSDQ9NZQ3 AC112229.1-201ENST00000639295 961 ntBASIC20.78■□□□□ 0.92
NCKIPSDQ9NZQ3 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
NCKIPSDQ9NZQ3 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
NCKIPSDQ9NZQ3 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
NCKIPSDQ9NZQ3 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
NCKIPSDQ9NZQ3 AC073130.3-201ENST00000624389 2278 ntBASIC20.78■□□□□ 0.92
NCKIPSDQ9NZQ3 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
NCKIPSDQ9NZQ3 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
NCKIPSDQ9NZQ3 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC20.77■□□□□ 0.92
NCKIPSDQ9NZQ3 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC20.77■□□□□ 0.92
NCKIPSDQ9NZQ3 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
NCKIPSDQ9NZQ3 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
NCKIPSDQ9NZQ3 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
NCKIPSDQ9NZQ3 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
NCKIPSDQ9NZQ3 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
NCKIPSDQ9NZQ3 METTL15-202ENST00000403099 795 ntTSL 5 BASIC20.77■□□□□ 0.92
NCKIPSDQ9NZQ3 APTR-205ENST00000447009 902 ntTSL 2 BASIC20.77■□□□□ 0.92
NCKIPSDQ9NZQ3 AF201337.1-201ENST00000520239 748 ntBASIC20.77■□□□□ 0.92
NCKIPSDQ9NZQ3 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC20.77■□□□□ 0.92
NCKIPSDQ9NZQ3 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.92
NCKIPSDQ9NZQ3 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
NCKIPSDQ9NZQ3 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC20.77■□□□□ 0.92
NCKIPSDQ9NZQ3 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC20.77■□□□□ 0.92
NCKIPSDQ9NZQ3 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
NCKIPSDQ9NZQ3 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC20.77■□□□□ 0.91
NCKIPSDQ9NZQ3 AL157384.1-201ENST00000445995 2473 ntBASIC20.77■□□□□ 0.91
NCKIPSDQ9NZQ3 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
NCKIPSDQ9NZQ3 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC20.76■□□□□ 0.91
NCKIPSDQ9NZQ3 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
NCKIPSDQ9NZQ3 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC20.76■□□□□ 0.91
NCKIPSDQ9NZQ3 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC20.76■□□□□ 0.91
NCKIPSDQ9NZQ3 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC20.76■□□□□ 0.91
NCKIPSDQ9NZQ3 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC20.76■□□□□ 0.91
NCKIPSDQ9NZQ3 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
NCKIPSDQ9NZQ3 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC20.76■□□□□ 0.91
NCKIPSDQ9NZQ3 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
NCKIPSDQ9NZQ3 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
NCKIPSDQ9NZQ3 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
NCKIPSDQ9NZQ3 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
NCKIPSDQ9NZQ3 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC20.76■□□□□ 0.91
NCKIPSDQ9NZQ3 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
NCKIPSDQ9NZQ3 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC20.76■□□□□ 0.91
NCKIPSDQ9NZQ3 AC053503.5-201ENST00000601508 636 ntBASIC20.76■□□□□ 0.91
NCKIPSDQ9NZQ3 GAMT-205ENST00000640762 751 ntTSL 5 BASIC20.76■□□□□ 0.91
NCKIPSDQ9NZQ3 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
NCKIPSDQ9NZQ3 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC20.76■□□□□ 0.91
NCKIPSDQ9NZQ3 LINC01521-201ENST00000504184 1943 ntBASIC20.76■□□□□ 0.91
NCKIPSDQ9NZQ3 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
NCKIPSDQ9NZQ3 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC20.76■□□□□ 0.91
NCKIPSDQ9NZQ3 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC20.76■□□□□ 0.91
NCKIPSDQ9NZQ3 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC20.76■□□□□ 0.91
NCKIPSDQ9NZQ3 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
NCKIPSDQ9NZQ3 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
NCKIPSDQ9NZQ3 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
NCKIPSDQ9NZQ3 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
NCKIPSDQ9NZQ3 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
NCKIPSDQ9NZQ3 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC20.75■□□□□ 0.91
NCKIPSDQ9NZQ3 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
NCKIPSDQ9NZQ3 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
NCKIPSDQ9NZQ3 BET1L-204ENST00000410108 637 ntTSL 3 BASIC20.75■□□□□ 0.91
NCKIPSDQ9NZQ3 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
NCKIPSDQ9NZQ3 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC20.75■□□□□ 0.91
NCKIPSDQ9NZQ3 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC20.75■□□□□ 0.91
NCKIPSDQ9NZQ3 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC20.75■□□□□ 0.91
NCKIPSDQ9NZQ3 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC20.75■□□□□ 0.91
NCKIPSDQ9NZQ3 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
NCKIPSDQ9NZQ3 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
NCKIPSDQ9NZQ3 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms