Protein–RNA interactions for Protein: Q9NUP9

LIN7C, Protein lin-7 homolog C, humanhuman

Known RBP Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7CQ9NUP9 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
LIN7CQ9NUP9 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
LIN7CQ9NUP9 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
LIN7CQ9NUP9 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LIN7CQ9NUP9 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LIN7CQ9NUP9 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC17.09■□□□□ 0.33
LIN7CQ9NUP9 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LIN7CQ9NUP9 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
LIN7CQ9NUP9 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC17.09■□□□□ 0.33
LIN7CQ9NUP9 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC17.09■□□□□ 0.33
LIN7CQ9NUP9 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC17.09■□□□□ 0.33
LIN7CQ9NUP9 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
LIN7CQ9NUP9 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
LIN7CQ9NUP9 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC17.09■□□□□ 0.33
LIN7CQ9NUP9 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
LIN7CQ9NUP9 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LIN7CQ9NUP9 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
LIN7CQ9NUP9 ADM-207ENST00000530439 1839 ntTSL 2 BASIC17.09■□□□□ 0.33
LIN7CQ9NUP9 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LIN7CQ9NUP9 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
LIN7CQ9NUP9 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
LIN7CQ9NUP9 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LIN7CQ9NUP9 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
LIN7CQ9NUP9 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LIN7CQ9NUP9 AC073314.1-201ENST00000568729 2216 ntBASIC17.09■□□□□ 0.33
LIN7CQ9NUP9 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LIN7CQ9NUP9 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
LIN7CQ9NUP9 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
LIN7CQ9NUP9 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
LIN7CQ9NUP9 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC17.08■□□□□ 0.33
LIN7CQ9NUP9 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
LIN7CQ9NUP9 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
LIN7CQ9NUP9 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
LIN7CQ9NUP9 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
LIN7CQ9NUP9 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC17.08■□□□□ 0.33
LIN7CQ9NUP9 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
LIN7CQ9NUP9 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC17.08■□□□□ 0.32
LIN7CQ9NUP9 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
LIN7CQ9NUP9 LINC02228-203ENST00000641970 1355 ntBASIC17.08■□□□□ 0.32
LIN7CQ9NUP9 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
LIN7CQ9NUP9 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
LIN7CQ9NUP9 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC17.08■□□□□ 0.32
LIN7CQ9NUP9 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC17.08■□□□□ 0.32
LIN7CQ9NUP9 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
LIN7CQ9NUP9 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
LIN7CQ9NUP9 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
LIN7CQ9NUP9 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC17.08■□□□□ 0.32
LIN7CQ9NUP9 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
LIN7CQ9NUP9 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC17.08■□□□□ 0.32
LIN7CQ9NUP9 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC17.08■□□□□ 0.32
LIN7CQ9NUP9 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
LIN7CQ9NUP9 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC17.08■□□□□ 0.32
LIN7CQ9NUP9 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
LIN7CQ9NUP9 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC17.07■□□□□ 0.32
LIN7CQ9NUP9 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC17.07■□□□□ 0.32
LIN7CQ9NUP9 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC17.07■□□□□ 0.32
LIN7CQ9NUP9 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC17.07■□□□□ 0.32
LIN7CQ9NUP9 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
LIN7CQ9NUP9 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
LIN7CQ9NUP9 FXN-202ENST00000396364 980 ntTSL 5 BASIC17.07■□□□□ 0.32
LIN7CQ9NUP9 AL121603.2-201ENST00000557373 2117 ntBASIC17.07■□□□□ 0.32
LIN7CQ9NUP9 TPRG1LP1-201ENST00000598702 760 ntBASIC17.07■□□□□ 0.32
LIN7CQ9NUP9 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
LIN7CQ9NUP9 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC17.07■□□□□ 0.32
LIN7CQ9NUP9 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
LIN7CQ9NUP9 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
LIN7CQ9NUP9 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
LIN7CQ9NUP9 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LIN7CQ9NUP9 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC17.06■□□□□ 0.32
LIN7CQ9NUP9 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC17.06■□□□□ 0.32
LIN7CQ9NUP9 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
LIN7CQ9NUP9 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
LIN7CQ9NUP9 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC17.06■□□□□ 0.32
LIN7CQ9NUP9 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LIN7CQ9NUP9 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC17.06■□□□□ 0.32
LIN7CQ9NUP9 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC17.06■□□□□ 0.32
LIN7CQ9NUP9 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LIN7CQ9NUP9 AC097381.1-201ENST00000429019 1296 ntBASIC17.06■□□□□ 0.32
LIN7CQ9NUP9 MIR6821-201ENST00000617625 74 ntBASIC17.06■□□□□ 0.32
LIN7CQ9NUP9 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC17.06■□□□□ 0.32
LIN7CQ9NUP9 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LIN7CQ9NUP9 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
LIN7CQ9NUP9 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
LIN7CQ9NUP9 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LIN7CQ9NUP9 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
LIN7CQ9NUP9 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC17.06■□□□□ 0.32
LIN7CQ9NUP9 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
LIN7CQ9NUP9 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
LIN7CQ9NUP9 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
LIN7CQ9NUP9 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LIN7CQ9NUP9 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
LIN7CQ9NUP9 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LIN7CQ9NUP9 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC17.05■□□□□ 0.32
LIN7CQ9NUP9 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
LIN7CQ9NUP9 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC17.05■□□□□ 0.32
LIN7CQ9NUP9 AC005224.4-201ENST00000583262 1652 ntBASIC17.05■□□□□ 0.32
LIN7CQ9NUP9 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LIN7CQ9NUP9 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
LIN7CQ9NUP9 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
LIN7CQ9NUP9 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms