Protein–RNA interactions for Protein: Q9NSD5

SLC6A13, Sodium- and chloride-dependent GABA transporter 2, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A13Q9NSD5 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC19.45■□□□□ 0.7
SLC6A13Q9NSD5 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC19.45■□□□□ 0.7
SLC6A13Q9NSD5 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC19.45■□□□□ 0.7
SLC6A13Q9NSD5 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC19.45■□□□□ 0.7
SLC6A13Q9NSD5 RARRES2P11-201ENST00000635158 484 ntBASIC19.45■□□□□ 0.7
SLC6A13Q9NSD5 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC19.45■□□□□ 0.7
SLC6A13Q9NSD5 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SLC6A13Q9NSD5 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC19.45■□□□□ 0.7
SLC6A13Q9NSD5 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SLC6A13Q9NSD5 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SLC6A13Q9NSD5 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SLC6A13Q9NSD5 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC19.45■□□□□ 0.7
SLC6A13Q9NSD5 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SLC6A13Q9NSD5 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
SLC6A13Q9NSD5 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SLC6A13Q9NSD5 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
SLC6A13Q9NSD5 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SLC6A13Q9NSD5 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC19.44■□□□□ 0.7
SLC6A13Q9NSD5 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SLC6A13Q9NSD5 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SLC6A13Q9NSD5 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
SLC6A13Q9NSD5 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC19.44■□□□□ 0.7
SLC6A13Q9NSD5 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC19.44■□□□□ 0.7
SLC6A13Q9NSD5 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC19.44■□□□□ 0.7
SLC6A13Q9NSD5 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC19.44■□□□□ 0.7
SLC6A13Q9NSD5 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
SLC6A13Q9NSD5 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SLC6A13Q9NSD5 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SLC6A13Q9NSD5 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
SLC6A13Q9NSD5 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SLC6A13Q9NSD5 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SLC6A13Q9NSD5 STAC-204ENST00000457375 1366 ntTSL 2 BASIC19.44■□□□□ 0.7
SLC6A13Q9NSD5 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SLC6A13Q9NSD5 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
SLC6A13Q9NSD5 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
SLC6A13Q9NSD5 KRT87P-202ENST00000534226 1464 ntBASIC19.43■□□□□ 0.7
SLC6A13Q9NSD5 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SLC6A13Q9NSD5 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SLC6A13Q9NSD5 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
SLC6A13Q9NSD5 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC19.43■□□□□ 0.7
SLC6A13Q9NSD5 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC19.43■□□□□ 0.7
SLC6A13Q9NSD5 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC19.43■□□□□ 0.7
SLC6A13Q9NSD5 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC19.43■□□□□ 0.7
SLC6A13Q9NSD5 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
SLC6A13Q9NSD5 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SLC6A13Q9NSD5 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC19.43■□□□□ 0.7
SLC6A13Q9NSD5 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SLC6A13Q9NSD5 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SLC6A13Q9NSD5 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC19.43■□□□□ 0.7
SLC6A13Q9NSD5 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
SLC6A13Q9NSD5 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC19.42■□□□□ 0.7
SLC6A13Q9NSD5 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC19.42■□□□□ 0.7
SLC6A13Q9NSD5 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SLC6A13Q9NSD5 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC19.42■□□□□ 0.7
SLC6A13Q9NSD5 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC19.42■□□□□ 0.7
SLC6A13Q9NSD5 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
SLC6A13Q9NSD5 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC19.42■□□□□ 0.7
SLC6A13Q9NSD5 SERP1-208ENST00000491660 830 ntTSL 2 BASIC19.42■□□□□ 0.7
SLC6A13Q9NSD5 AC079140.4-201ENST00000507448 529 ntBASIC19.42■□□□□ 0.7
SLC6A13Q9NSD5 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC19.42■□□□□ 0.7
SLC6A13Q9NSD5 AL358852.1-201ENST00000623174 1268 ntBASIC19.42■□□□□ 0.7
SLC6A13Q9NSD5 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SLC6A13Q9NSD5 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
SLC6A13Q9NSD5 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
SLC6A13Q9NSD5 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SLC6A13Q9NSD5 BID-204ENST00000399767 2129 ntTSL 2 BASIC19.42■□□□□ 0.7
SLC6A13Q9NSD5 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SLC6A13Q9NSD5 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC19.41■□□□□ 0.7
SLC6A13Q9NSD5 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SLC6A13Q9NSD5 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SLC6A13Q9NSD5 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC19.41■□□□□ 0.7
SLC6A13Q9NSD5 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SLC6A13Q9NSD5 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SLC6A13Q9NSD5 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
SLC6A13Q9NSD5 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC19.41■□□□□ 0.7
SLC6A13Q9NSD5 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC19.41■□□□□ 0.7
SLC6A13Q9NSD5 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SLC6A13Q9NSD5 NAA20-201ENST00000310450 920 ntTSL 2 BASIC19.41■□□□□ 0.7
SLC6A13Q9NSD5 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SLC6A13Q9NSD5 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SLC6A13Q9NSD5 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC19.41■□□□□ 0.7
SLC6A13Q9NSD5 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC19.41■□□□□ 0.7
SLC6A13Q9NSD5 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SLC6A13Q9NSD5 AL139246.5-201ENST00000606645 996 ntBASIC19.41■□□□□ 0.7
SLC6A13Q9NSD5 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
SLC6A13Q9NSD5 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC19.41■□□□□ 0.7
SLC6A13Q9NSD5 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC19.41■□□□□ 0.7
SLC6A13Q9NSD5 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SLC6A13Q9NSD5 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC19.41■□□□□ 0.7
SLC6A13Q9NSD5 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
SLC6A13Q9NSD5 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SLC6A13Q9NSD5 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
SLC6A13Q9NSD5 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
SLC6A13Q9NSD5 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC19.41■□□□□ 0.7
SLC6A13Q9NSD5 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC19.41■□□□□ 0.7
SLC6A13Q9NSD5 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SLC6A13Q9NSD5 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC19.41■□□□□ 0.7
SLC6A13Q9NSD5 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC19.4■□□□□ 0.7
SLC6A13Q9NSD5 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SLC6A13Q9NSD5 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 62.7 ms