Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC10.69□□□□□ -0.7
CDC42SE1Q9NRR8 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC10.69□□□□□ -0.7
CDC42SE1Q9NRR8 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
CDC42SE1Q9NRR8 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
CDC42SE1Q9NRR8 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC10.69□□□□□ -0.7
CDC42SE1Q9NRR8 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC10.69□□□□□ -0.7
CDC42SE1Q9NRR8 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
CDC42SE1Q9NRR8 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
CDC42SE1Q9NRR8 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
CDC42SE1Q9NRR8 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
CDC42SE1Q9NRR8 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC10.69□□□□□ -0.7
CDC42SE1Q9NRR8 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC10.69□□□□□ -0.7
CDC42SE1Q9NRR8 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC10.69□□□□□ -0.7
CDC42SE1Q9NRR8 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC10.69□□□□□ -0.7
CDC42SE1Q9NRR8 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
CDC42SE1Q9NRR8 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC10.69□□□□□ -0.7
CDC42SE1Q9NRR8 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
CDC42SE1Q9NRR8 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
CDC42SE1Q9NRR8 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
CDC42SE1Q9NRR8 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
CDC42SE1Q9NRR8 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC10.69□□□□□ -0.7
CDC42SE1Q9NRR8 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC10.69□□□□□ -0.7
CDC42SE1Q9NRR8 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
CDC42SE1Q9NRR8 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
CDC42SE1Q9NRR8 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
CDC42SE1Q9NRR8 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC10.69□□□□□ -0.7
CDC42SE1Q9NRR8 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
CDC42SE1Q9NRR8 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
CDC42SE1Q9NRR8 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
CDC42SE1Q9NRR8 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC10.68□□□□□ -0.7
CDC42SE1Q9NRR8 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
CDC42SE1Q9NRR8 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
CDC42SE1Q9NRR8 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC10.68□□□□□ -0.7
CDC42SE1Q9NRR8 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
CDC42SE1Q9NRR8 AC009053.2-201ENST00000563701 2365 ntBASIC10.68□□□□□ -0.7
CDC42SE1Q9NRR8 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
CDC42SE1Q9NRR8 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
CDC42SE1Q9NRR8 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC10.68□□□□□ -0.7
CDC42SE1Q9NRR8 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
CDC42SE1Q9NRR8 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC10.68□□□□□ -0.7
CDC42SE1Q9NRR8 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
CDC42SE1Q9NRR8 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
CDC42SE1Q9NRR8 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
CDC42SE1Q9NRR8 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC10.68□□□□□ -0.7
CDC42SE1Q9NRR8 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC10.68□□□□□ -0.7
CDC42SE1Q9NRR8 TUB-203ENST00000534099 1759 ntTSL 2 BASIC10.68□□□□□ -0.7
CDC42SE1Q9NRR8 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
CDC42SE1Q9NRR8 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC10.68□□□□□ -0.7
CDC42SE1Q9NRR8 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC10.68□□□□□ -0.7
CDC42SE1Q9NRR8 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
CDC42SE1Q9NRR8 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC10.68□□□□□ -0.7
CDC42SE1Q9NRR8 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
CDC42SE1Q9NRR8 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC10.68□□□□□ -0.7
CDC42SE1Q9NRR8 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC10.68□□□□□ -0.7
CDC42SE1Q9NRR8 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC10.68□□□□□ -0.7
CDC42SE1Q9NRR8 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
CDC42SE1Q9NRR8 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
CDC42SE1Q9NRR8 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC10.68□□□□□ -0.7
CDC42SE1Q9NRR8 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
CDC42SE1Q9NRR8 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
CDC42SE1Q9NRR8 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC10.68□□□□□ -0.7
CDC42SE1Q9NRR8 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
CDC42SE1Q9NRR8 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
CDC42SE1Q9NRR8 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
CDC42SE1Q9NRR8 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
CDC42SE1Q9NRR8 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC10.68□□□□□ -0.7
CDC42SE1Q9NRR8 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
CDC42SE1Q9NRR8 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC10.68□□□□□ -0.7
CDC42SE1Q9NRR8 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC10.67□□□□□ -0.7
CDC42SE1Q9NRR8 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
CDC42SE1Q9NRR8 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC10.67□□□□□ -0.7
CDC42SE1Q9NRR8 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
CDC42SE1Q9NRR8 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
CDC42SE1Q9NRR8 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
CDC42SE1Q9NRR8 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
CDC42SE1Q9NRR8 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
CDC42SE1Q9NRR8 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC10.67□□□□□ -0.7
CDC42SE1Q9NRR8 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
CDC42SE1Q9NRR8 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
CDC42SE1Q9NRR8 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC10.67□□□□□ -0.7
CDC42SE1Q9NRR8 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
CDC42SE1Q9NRR8 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
CDC42SE1Q9NRR8 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
CDC42SE1Q9NRR8 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
CDC42SE1Q9NRR8 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC10.67□□□□□ -0.7
CDC42SE1Q9NRR8 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC10.67□□□□□ -0.7
CDC42SE1Q9NRR8 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
CDC42SE1Q9NRR8 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC10.67□□□□□ -0.7
CDC42SE1Q9NRR8 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
CDC42SE1Q9NRR8 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC10.67□□□□□ -0.7
CDC42SE1Q9NRR8 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC10.67□□□□□ -0.7
CDC42SE1Q9NRR8 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
CDC42SE1Q9NRR8 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC10.67□□□□□ -0.7
CDC42SE1Q9NRR8 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
CDC42SE1Q9NRR8 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
CDC42SE1Q9NRR8 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
CDC42SE1Q9NRR8 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
CDC42SE1Q9NRR8 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
CDC42SE1Q9NRR8 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
CDC42SE1Q9NRR8 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC10.67□□□□□ -0.7
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms