Protein–RNA interactions for Protein: Q9HCP0

CSNK1G1, Casein kinase I isoform gamma-1, humanhuman

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G1Q9HCP0 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
CSNK1G1Q9HCP0 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC21.66■■□□□ 1.06
CSNK1G1Q9HCP0 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
CSNK1G1Q9HCP0 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC21.66■■□□□ 1.06
CSNK1G1Q9HCP0 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CSNK1G1Q9HCP0 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CSNK1G1Q9HCP0 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC21.66■■□□□ 1.06
CSNK1G1Q9HCP0 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC21.66■■□□□ 1.06
CSNK1G1Q9HCP0 GCK-205ENST00000437084 1385 ntTSL 5 BASIC21.66■■□□□ 1.06
CSNK1G1Q9HCP0 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CSNK1G1Q9HCP0 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC21.66■■□□□ 1.06
CSNK1G1Q9HCP0 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC21.66■■□□□ 1.06
CSNK1G1Q9HCP0 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
CSNK1G1Q9HCP0 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CSNK1G1Q9HCP0 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC21.66■■□□□ 1.06
CSNK1G1Q9HCP0 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CSNK1G1Q9HCP0 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CSNK1G1Q9HCP0 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC21.65■■□□□ 1.06
CSNK1G1Q9HCP0 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC21.65■■□□□ 1.06
CSNK1G1Q9HCP0 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CSNK1G1Q9HCP0 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC21.65■■□□□ 1.06
CSNK1G1Q9HCP0 KRT18P68-201ENST00000392293 1000 ntBASIC21.65■■□□□ 1.06
CSNK1G1Q9HCP0 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
CSNK1G1Q9HCP0 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
CSNK1G1Q9HCP0 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CSNK1G1Q9HCP0 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC21.65■■□□□ 1.06
CSNK1G1Q9HCP0 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC21.65■■□□□ 1.06
CSNK1G1Q9HCP0 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CSNK1G1Q9HCP0 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC21.65■■□□□ 1.06
CSNK1G1Q9HCP0 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CSNK1G1Q9HCP0 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
CSNK1G1Q9HCP0 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC21.65■■□□□ 1.06
CSNK1G1Q9HCP0 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CSNK1G1Q9HCP0 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC21.65■■□□□ 1.06
CSNK1G1Q9HCP0 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
CSNK1G1Q9HCP0 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.06
CSNK1G1Q9HCP0 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
CSNK1G1Q9HCP0 AC121338.2-201ENST00000622535 1744 ntBASIC21.64■■□□□ 1.06
CSNK1G1Q9HCP0 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CSNK1G1Q9HCP0 APTR-205ENST00000447009 902 ntTSL 2 BASIC21.64■■□□□ 1.05
CSNK1G1Q9HCP0 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC21.64■■□□□ 1.05
CSNK1G1Q9HCP0 MYC-209ENST00000641252 345 ntBASIC21.64■■□□□ 1.05
CSNK1G1Q9HCP0 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
CSNK1G1Q9HCP0 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
CSNK1G1Q9HCP0 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC21.64■■□□□ 1.05
CSNK1G1Q9HCP0 AC087633.2-202ENST00000565166 1439 ntBASIC21.63■■□□□ 1.05
CSNK1G1Q9HCP0 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CSNK1G1Q9HCP0 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC21.63■■□□□ 1.05
CSNK1G1Q9HCP0 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CSNK1G1Q9HCP0 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CSNK1G1Q9HCP0 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CSNK1G1Q9HCP0 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC21.63■■□□□ 1.05
CSNK1G1Q9HCP0 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CSNK1G1Q9HCP0 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC21.63■■□□□ 1.05
CSNK1G1Q9HCP0 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CSNK1G1Q9HCP0 KLF13-207ENST00000560473 489 ntTSL 3 BASIC21.63■■□□□ 1.05
CSNK1G1Q9HCP0 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CSNK1G1Q9HCP0 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CSNK1G1Q9HCP0 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CSNK1G1Q9HCP0 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CSNK1G1Q9HCP0 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
CSNK1G1Q9HCP0 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CSNK1G1Q9HCP0 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
CSNK1G1Q9HCP0 AC027702.1-201ENST00000563810 1770 ntBASIC21.62■■□□□ 1.05
CSNK1G1Q9HCP0 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CSNK1G1Q9HCP0 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CSNK1G1Q9HCP0 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CSNK1G1Q9HCP0 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC21.62■■□□□ 1.05
CSNK1G1Q9HCP0 LSM12P1-201ENST00000411836 588 ntBASIC21.62■■□□□ 1.05
CSNK1G1Q9HCP0 AC091874.3-201ENST00000512672 1195 ntBASIC21.62■■□□□ 1.05
CSNK1G1Q9HCP0 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC21.62■■□□□ 1.05
CSNK1G1Q9HCP0 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
CSNK1G1Q9HCP0 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC21.62■■□□□ 1.05
CSNK1G1Q9HCP0 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC21.62■■□□□ 1.05
CSNK1G1Q9HCP0 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CSNK1G1Q9HCP0 AL589743.5-201ENST00000616611 1050 ntBASIC21.62■■□□□ 1.05
CSNK1G1Q9HCP0 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
CSNK1G1Q9HCP0 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CSNK1G1Q9HCP0 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
CSNK1G1Q9HCP0 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CSNK1G1Q9HCP0 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
CSNK1G1Q9HCP0 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CSNK1G1Q9HCP0 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CSNK1G1Q9HCP0 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
CSNK1G1Q9HCP0 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC21.61■■□□□ 1.05
CSNK1G1Q9HCP0 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC21.61■■□□□ 1.05
CSNK1G1Q9HCP0 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC21.61■■□□□ 1.05
CSNK1G1Q9HCP0 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC21.61■■□□□ 1.05
CSNK1G1Q9HCP0 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC21.61■■□□□ 1.05
CSNK1G1Q9HCP0 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
CSNK1G1Q9HCP0 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
CSNK1G1Q9HCP0 STAC-204ENST00000457375 1366 ntTSL 2 BASIC21.61■■□□□ 1.05
CSNK1G1Q9HCP0 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
CSNK1G1Q9HCP0 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
CSNK1G1Q9HCP0 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CSNK1G1Q9HCP0 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC21.6■■□□□ 1.05
CSNK1G1Q9HCP0 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CSNK1G1Q9HCP0 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
CSNK1G1Q9HCP0 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CSNK1G1Q9HCP0 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms