Protein–RNA interactions for Protein: Q9H9S0

NANOG, Homeobox protein NANOG, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NANOGQ9H9S0 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC19.54■□□□□ 0.72
NANOGQ9H9S0 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
NANOGQ9H9S0 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC19.54■□□□□ 0.72
NANOGQ9H9S0 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC19.54■□□□□ 0.72
NANOGQ9H9S0 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC19.54■□□□□ 0.72
NANOGQ9H9S0 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC19.54■□□□□ 0.72
NANOGQ9H9S0 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC19.54■□□□□ 0.72
NANOGQ9H9S0 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
NANOGQ9H9S0 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
NANOGQ9H9S0 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
NANOGQ9H9S0 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
NANOGQ9H9S0 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC19.53■□□□□ 0.72
NANOGQ9H9S0 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
NANOGQ9H9S0 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
NANOGQ9H9S0 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC19.53■□□□□ 0.72
NANOGQ9H9S0 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
NANOGQ9H9S0 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
NANOGQ9H9S0 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
NANOGQ9H9S0 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC19.53■□□□□ 0.72
NANOGQ9H9S0 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC19.53■□□□□ 0.72
NANOGQ9H9S0 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
NANOGQ9H9S0 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC19.53■□□□□ 0.72
NANOGQ9H9S0 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
NANOGQ9H9S0 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
NANOGQ9H9S0 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC19.53■□□□□ 0.72
NANOGQ9H9S0 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC19.53■□□□□ 0.72
NANOGQ9H9S0 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
NANOGQ9H9S0 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
NANOGQ9H9S0 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
NANOGQ9H9S0 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
NANOGQ9H9S0 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
NANOGQ9H9S0 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
NANOGQ9H9S0 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC19.52■□□□□ 0.72
NANOGQ9H9S0 UNC93B3-201ENST00000308076 687 ntBASIC19.52■□□□□ 0.72
NANOGQ9H9S0 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
NANOGQ9H9S0 LHPP-203ENST00000392757 840 ntTSL 3 BASIC19.52■□□□□ 0.72
NANOGQ9H9S0 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
NANOGQ9H9S0 AICDA-202ENST00000537228 667 ntTSL 5 BASIC19.52■□□□□ 0.72
NANOGQ9H9S0 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
NANOGQ9H9S0 AC105233.4-201ENST00000642045 216 ntBASIC19.52■□□□□ 0.72
NANOGQ9H9S0 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
NANOGQ9H9S0 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
NANOGQ9H9S0 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
NANOGQ9H9S0 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
NANOGQ9H9S0 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
NANOGQ9H9S0 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
NANOGQ9H9S0 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
NANOGQ9H9S0 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.71
NANOGQ9H9S0 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
NANOGQ9H9S0 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
NANOGQ9H9S0 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
NANOGQ9H9S0 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
NANOGQ9H9S0 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
NANOGQ9H9S0 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC19.51■□□□□ 0.71
NANOGQ9H9S0 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC19.51■□□□□ 0.71
NANOGQ9H9S0 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
NANOGQ9H9S0 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC19.51■□□□□ 0.71
NANOGQ9H9S0 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC19.51■□□□□ 0.71
NANOGQ9H9S0 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
NANOGQ9H9S0 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
NANOGQ9H9S0 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
NANOGQ9H9S0 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC19.51■□□□□ 0.71
NANOGQ9H9S0 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC19.51■□□□□ 0.71
NANOGQ9H9S0 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
NANOGQ9H9S0 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
NANOGQ9H9S0 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
NANOGQ9H9S0 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC19.5■□□□□ 0.71
NANOGQ9H9S0 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
NANOGQ9H9S0 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC19.5■□□□□ 0.71
NANOGQ9H9S0 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
NANOGQ9H9S0 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC19.5■□□□□ 0.71
NANOGQ9H9S0 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
NANOGQ9H9S0 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
NANOGQ9H9S0 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
NANOGQ9H9S0 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC19.5■□□□□ 0.71
NANOGQ9H9S0 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
NANOGQ9H9S0 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC19.5■□□□□ 0.71
NANOGQ9H9S0 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC19.5■□□□□ 0.71
NANOGQ9H9S0 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
NANOGQ9H9S0 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
NANOGQ9H9S0 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
NANOGQ9H9S0 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
NANOGQ9H9S0 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
NANOGQ9H9S0 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
NANOGQ9H9S0 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC19.5■□□□□ 0.71
NANOGQ9H9S0 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
NANOGQ9H9S0 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC19.5■□□□□ 0.71
NANOGQ9H9S0 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC19.5■□□□□ 0.71
NANOGQ9H9S0 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC19.5■□□□□ 0.71
NANOGQ9H9S0 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
NANOGQ9H9S0 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
NANOGQ9H9S0 AC061975.6-201ENST00000579045 1553 ntBASIC19.49■□□□□ 0.71
NANOGQ9H9S0 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
NANOGQ9H9S0 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
NANOGQ9H9S0 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
NANOGQ9H9S0 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC19.49■□□□□ 0.71
NANOGQ9H9S0 AP004607.4-201ENST00000530158 1459 ntBASIC19.49■□□□□ 0.71
NANOGQ9H9S0 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
NANOGQ9H9S0 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
NANOGQ9H9S0 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms