Protein–RNA interactions for Protein: Q9H8Y1

VRTN, Vertnin, humanhuman

Predictions only

Length 702 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRTNQ9H8Y1 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
VRTNQ9H8Y1 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC22.03■■□□□ 1.12
VRTNQ9H8Y1 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
VRTNQ9H8Y1 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
VRTNQ9H8Y1 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC22.02■■□□□ 1.12
VRTNQ9H8Y1 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC22.02■■□□□ 1.12
VRTNQ9H8Y1 MCRIP2P1-201ENST00000394346 511 ntBASIC22.02■■□□□ 1.12
VRTNQ9H8Y1 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC22.02■■□□□ 1.12
VRTNQ9H8Y1 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
VRTNQ9H8Y1 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
VRTNQ9H8Y1 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC22.02■■□□□ 1.12
VRTNQ9H8Y1 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC22.02■■□□□ 1.12
VRTNQ9H8Y1 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC22.02■■□□□ 1.11
VRTNQ9H8Y1 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
VRTNQ9H8Y1 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC22.01■■□□□ 1.11
VRTNQ9H8Y1 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
VRTNQ9H8Y1 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC22.01■■□□□ 1.11
VRTNQ9H8Y1 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC22.01■■□□□ 1.11
VRTNQ9H8Y1 WT1-AS_3.1-201ENST00000613262 234 ntBASIC22.01■■□□□ 1.11
VRTNQ9H8Y1 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
VRTNQ9H8Y1 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC22.01■■□□□ 1.11
VRTNQ9H8Y1 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC22.01■■□□□ 1.11
VRTNQ9H8Y1 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC22.01■■□□□ 1.11
VRTNQ9H8Y1 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
VRTNQ9H8Y1 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC22.01■■□□□ 1.11
VRTNQ9H8Y1 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
VRTNQ9H8Y1 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC22■■□□□ 1.11
VRTNQ9H8Y1 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC22■■□□□ 1.11
VRTNQ9H8Y1 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
VRTNQ9H8Y1 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC22■■□□□ 1.11
VRTNQ9H8Y1 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC22■■□□□ 1.11
VRTNQ9H8Y1 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC22■■□□□ 1.11
VRTNQ9H8Y1 ID1-201ENST00000376105 1233 ntBASIC22■■□□□ 1.11
VRTNQ9H8Y1 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC22■■□□□ 1.11
VRTNQ9H8Y1 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC22■■□□□ 1.11
VRTNQ9H8Y1 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC22■■□□□ 1.11
VRTNQ9H8Y1 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC22■■□□□ 1.11
VRTNQ9H8Y1 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC22■■□□□ 1.11
VRTNQ9H8Y1 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC22■■□□□ 1.11
VRTNQ9H8Y1 AC104771.1-201ENST00000603335 964 ntBASIC22■■□□□ 1.11
VRTNQ9H8Y1 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
VRTNQ9H8Y1 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC22■■□□□ 1.11
VRTNQ9H8Y1 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC22■■□□□ 1.11
VRTNQ9H8Y1 AC006128.1-201ENST00000624704 1661 ntBASIC22■■□□□ 1.11
VRTNQ9H8Y1 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC22■■□□□ 1.11
VRTNQ9H8Y1 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC22■■□□□ 1.11
VRTNQ9H8Y1 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC22■■□□□ 1.11
VRTNQ9H8Y1 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC22■■□□□ 1.11
VRTNQ9H8Y1 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
VRTNQ9H8Y1 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC21.99■■□□□ 1.11
VRTNQ9H8Y1 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
VRTNQ9H8Y1 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
VRTNQ9H8Y1 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
VRTNQ9H8Y1 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC21.99■■□□□ 1.11
VRTNQ9H8Y1 AC087633.2-202ENST00000565166 1439 ntBASIC21.99■■□□□ 1.11
VRTNQ9H8Y1 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
VRTNQ9H8Y1 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
VRTNQ9H8Y1 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
VRTNQ9H8Y1 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC21.99■■□□□ 1.11
VRTNQ9H8Y1 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC21.99■■□□□ 1.11
VRTNQ9H8Y1 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
VRTNQ9H8Y1 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC21.99■■□□□ 1.11
VRTNQ9H8Y1 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC21.99■■□□□ 1.11
VRTNQ9H8Y1 CYP2T3P-201ENST00000601990 817 ntBASIC21.99■■□□□ 1.11
VRTNQ9H8Y1 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC21.99■■□□□ 1.11
VRTNQ9H8Y1 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
VRTNQ9H8Y1 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
VRTNQ9H8Y1 MKRN4P-201ENST00000444706 1521 ntBASIC21.99■■□□□ 1.11
VRTNQ9H8Y1 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
VRTNQ9H8Y1 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC21.99■■□□□ 1.11
VRTNQ9H8Y1 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
VRTNQ9H8Y1 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC21.98■■□□□ 1.11
VRTNQ9H8Y1 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC21.98■■□□□ 1.11
VRTNQ9H8Y1 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC21.98■■□□□ 1.11
VRTNQ9H8Y1 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC21.98■■□□□ 1.11
VRTNQ9H8Y1 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
VRTNQ9H8Y1 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
VRTNQ9H8Y1 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC21.98■■□□□ 1.11
VRTNQ9H8Y1 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC21.98■■□□□ 1.11
VRTNQ9H8Y1 AL109923.1-201ENST00000618799 583 ntBASIC21.98■■□□□ 1.11
VRTNQ9H8Y1 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC21.98■■□□□ 1.11
VRTNQ9H8Y1 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
VRTNQ9H8Y1 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
VRTNQ9H8Y1 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC21.98■■□□□ 1.11
VRTNQ9H8Y1 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC21.98■■□□□ 1.11
VRTNQ9H8Y1 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
VRTNQ9H8Y1 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC21.97■■□□□ 1.11
VRTNQ9H8Y1 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
VRTNQ9H8Y1 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC21.97■■□□□ 1.11
VRTNQ9H8Y1 AL137060.1-201ENST00000618151 2648 ntBASIC21.97■■□□□ 1.11
VRTNQ9H8Y1 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
VRTNQ9H8Y1 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC21.97■■□□□ 1.11
VRTNQ9H8Y1 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
VRTNQ9H8Y1 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
VRTNQ9H8Y1 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC21.97■■□□□ 1.11
VRTNQ9H8Y1 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
VRTNQ9H8Y1 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC21.97■■□□□ 1.11
VRTNQ9H8Y1 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC21.97■■□□□ 1.11
VRTNQ9H8Y1 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC21.97■■□□□ 1.11
VRTNQ9H8Y1 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC21.97■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms