Protein–RNA interactions for Protein: Q9H4P4

RNF41, E3 ubiquitin-protein ligase NRDP1, humanhuman

Predicted RBP Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41Q9H4P4 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC24.37■■□□□ 1.49
RNF41Q9H4P4 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC24.37■■□□□ 1.49
RNF41Q9H4P4 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
RNF41Q9H4P4 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC24.36■■□□□ 1.49
RNF41Q9H4P4 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
RNF41Q9H4P4 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
RNF41Q9H4P4 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC24.36■■□□□ 1.49
RNF41Q9H4P4 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC24.36■■□□□ 1.49
RNF41Q9H4P4 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC24.36■■□□□ 1.49
RNF41Q9H4P4 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC24.36■■□□□ 1.49
RNF41Q9H4P4 WT1-AS_3.1-201ENST00000613262 234 ntBASIC24.36■■□□□ 1.49
RNF41Q9H4P4 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC24.36■■□□□ 1.49
RNF41Q9H4P4 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC24.36■■□□□ 1.49
RNF41Q9H4P4 AC005229.4-201ENST00000610085 2198 ntBASIC24.36■■□□□ 1.49
RNF41Q9H4P4 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC24.35■■□□□ 1.49
RNF41Q9H4P4 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
RNF41Q9H4P4 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
RNF41Q9H4P4 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
RNF41Q9H4P4 AC093787.1-201ENST00000450396 207 ntBASIC24.35■■□□□ 1.49
RNF41Q9H4P4 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC24.35■■□□□ 1.49
RNF41Q9H4P4 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
RNF41Q9H4P4 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC24.35■■□□□ 1.49
RNF41Q9H4P4 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC24.34■■□□□ 1.49
RNF41Q9H4P4 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
RNF41Q9H4P4 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC24.34■■□□□ 1.49
RNF41Q9H4P4 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC24.34■■□□□ 1.49
RNF41Q9H4P4 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
RNF41Q9H4P4 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC24.34■■□□□ 1.49
RNF41Q9H4P4 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC24.34■■□□□ 1.49
RNF41Q9H4P4 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC24.34■■□□□ 1.49
RNF41Q9H4P4 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC24.34■■□□□ 1.49
RNF41Q9H4P4 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
RNF41Q9H4P4 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC24.34■■□□□ 1.49
RNF41Q9H4P4 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
RNF41Q9H4P4 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC24.34■■□□□ 1.49
RNF41Q9H4P4 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
RNF41Q9H4P4 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
RNF41Q9H4P4 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
RNF41Q9H4P4 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC24.34■■□□□ 1.49
RNF41Q9H4P4 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
RNF41Q9H4P4 AC010980.2-201ENST00000587099 1412 ntBASIC24.34■■□□□ 1.49
RNF41Q9H4P4 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
RNF41Q9H4P4 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC24.34■■□□□ 1.49
RNF41Q9H4P4 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
RNF41Q9H4P4 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC24.34■■□□□ 1.49
RNF41Q9H4P4 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC24.33■■□□□ 1.49
RNF41Q9H4P4 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC24.33■■□□□ 1.49
RNF41Q9H4P4 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
RNF41Q9H4P4 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC24.33■■□□□ 1.49
RNF41Q9H4P4 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC24.33■■□□□ 1.49
RNF41Q9H4P4 ID1-201ENST00000376105 1233 ntBASIC24.33■■□□□ 1.49
RNF41Q9H4P4 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC24.33■■□□□ 1.49
RNF41Q9H4P4 MKRN4P-201ENST00000444706 1521 ntBASIC24.33■■□□□ 1.49
RNF41Q9H4P4 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC24.33■■□□□ 1.49
RNF41Q9H4P4 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC24.33■■□□□ 1.49
RNF41Q9H4P4 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
RNF41Q9H4P4 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC24.33■■□□□ 1.49
RNF41Q9H4P4 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC24.33■■□□□ 1.48
RNF41Q9H4P4 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
RNF41Q9H4P4 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
RNF41Q9H4P4 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
RNF41Q9H4P4 STAC-204ENST00000457375 1366 ntTSL 2 BASIC24.32■■□□□ 1.48
RNF41Q9H4P4 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
RNF41Q9H4P4 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC24.32■■□□□ 1.48
RNF41Q9H4P4 SLC29A4P1-201ENST00000398760 971 ntBASIC24.32■■□□□ 1.48
RNF41Q9H4P4 TSPY6P-201ENST00000448518 926 ntBASIC24.32■■□□□ 1.48
RNF41Q9H4P4 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC24.32■■□□□ 1.48
RNF41Q9H4P4 AL109923.1-201ENST00000618799 583 ntBASIC24.32■■□□□ 1.48
RNF41Q9H4P4 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
RNF41Q9H4P4 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
RNF41Q9H4P4 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC24.32■■□□□ 1.48
RNF41Q9H4P4 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
RNF41Q9H4P4 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
RNF41Q9H4P4 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC24.32■■□□□ 1.48
RNF41Q9H4P4 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC24.31■■□□□ 1.48
RNF41Q9H4P4 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC24.31■■□□□ 1.48
RNF41Q9H4P4 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC24.31■■□□□ 1.48
RNF41Q9H4P4 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
RNF41Q9H4P4 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
RNF41Q9H4P4 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC24.31■■□□□ 1.48
RNF41Q9H4P4 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC24.31■■□□□ 1.48
RNF41Q9H4P4 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC24.31■■□□□ 1.48
RNF41Q9H4P4 MCRIP2P1-201ENST00000394346 511 ntBASIC24.31■■□□□ 1.48
RNF41Q9H4P4 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC24.31■■□□□ 1.48
RNF41Q9H4P4 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC24.31■■□□□ 1.48
RNF41Q9H4P4 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC24.31■■□□□ 1.48
RNF41Q9H4P4 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC24.31■■□□□ 1.48
RNF41Q9H4P4 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
RNF41Q9H4P4 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC24.31■■□□□ 1.48
RNF41Q9H4P4 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC24.31■■□□□ 1.48
RNF41Q9H4P4 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC24.31■■□□□ 1.48
RNF41Q9H4P4 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
RNF41Q9H4P4 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
RNF41Q9H4P4 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC24.31■■□□□ 1.48
RNF41Q9H4P4 CYP21A1P-202ENST00000354927 1481 ntBASIC24.31■■□□□ 1.48
RNF41Q9H4P4 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
RNF41Q9H4P4 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC24.3■■□□□ 1.48
RNF41Q9H4P4 ERF-202ENST00000440177 2032 ntTSL 2 BASIC24.3■■□□□ 1.48
RNF41Q9H4P4 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
RNF41Q9H4P4 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC24.3■■□□□ 1.48
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms