Protein–RNA interactions for Protein: Q9H321

VCX3B, Variable charge X-linked protein 3B, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3BQ9H321 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC19.64■□□□□ 0.73
VCX3BQ9H321 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC19.64■□□□□ 0.73
VCX3BQ9H321 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
VCX3BQ9H321 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
VCX3BQ9H321 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
VCX3BQ9H321 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC19.63■□□□□ 0.73
VCX3BQ9H321 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC19.63■□□□□ 0.73
VCX3BQ9H321 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
VCX3BQ9H321 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
VCX3BQ9H321 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
VCX3BQ9H321 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
VCX3BQ9H321 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
VCX3BQ9H321 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC19.63■□□□□ 0.73
VCX3BQ9H321 AC020763.4-201ENST00000623414 4170 ntBASIC19.63■□□□□ 0.73
VCX3BQ9H321 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
VCX3BQ9H321 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
VCX3BQ9H321 DUX4L9-201ENST00000449051 1259 ntBASIC19.63■□□□□ 0.73
VCX3BQ9H321 HYI-210ENST00000486909 905 ntTSL 5 BASIC19.63■□□□□ 0.73
VCX3BQ9H321 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC19.63■□□□□ 0.73
VCX3BQ9H321 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
VCX3BQ9H321 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
VCX3BQ9H321 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
VCX3BQ9H321 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
VCX3BQ9H321 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC19.62■□□□□ 0.73
VCX3BQ9H321 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
VCX3BQ9H321 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
VCX3BQ9H321 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC19.62■□□□□ 0.73
VCX3BQ9H321 AC004408.2-201ENST00000623613 2777 ntBASIC19.62■□□□□ 0.73
VCX3BQ9H321 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
VCX3BQ9H321 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
VCX3BQ9H321 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
VCX3BQ9H321 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
VCX3BQ9H321 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC19.62■□□□□ 0.73
VCX3BQ9H321 THA1P-201ENST00000590384 1145 ntBASIC19.62■□□□□ 0.73
VCX3BQ9H321 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
VCX3BQ9H321 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
VCX3BQ9H321 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
VCX3BQ9H321 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
VCX3BQ9H321 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC19.62■□□□□ 0.73
VCX3BQ9H321 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
VCX3BQ9H321 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC19.61■□□□□ 0.73
VCX3BQ9H321 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
VCX3BQ9H321 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
VCX3BQ9H321 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
VCX3BQ9H321 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
VCX3BQ9H321 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
VCX3BQ9H321 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
VCX3BQ9H321 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
VCX3BQ9H321 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
VCX3BQ9H321 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC19.6■□□□□ 0.73
VCX3BQ9H321 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC19.6■□□□□ 0.73
VCX3BQ9H321 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
VCX3BQ9H321 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
VCX3BQ9H321 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
VCX3BQ9H321 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
VCX3BQ9H321 AC005703.6-201ENST00000623265 1329 ntBASIC19.6■□□□□ 0.73
VCX3BQ9H321 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC19.6■□□□□ 0.73
VCX3BQ9H321 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
VCX3BQ9H321 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
VCX3BQ9H321 SNX5-217ENST00000606557 1087 ntBASIC19.6■□□□□ 0.73
VCX3BQ9H321 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
VCX3BQ9H321 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
VCX3BQ9H321 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
VCX3BQ9H321 BID-203ENST00000399765 1879 ntTSL 2 BASIC19.6■□□□□ 0.73
VCX3BQ9H321 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
VCX3BQ9H321 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
VCX3BQ9H321 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
VCX3BQ9H321 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
VCX3BQ9H321 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
VCX3BQ9H321 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
VCX3BQ9H321 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
VCX3BQ9H321 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC19.59■□□□□ 0.73
VCX3BQ9H321 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
VCX3BQ9H321 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
VCX3BQ9H321 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC19.59■□□□□ 0.73
VCX3BQ9H321 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
VCX3BQ9H321 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
VCX3BQ9H321 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
VCX3BQ9H321 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
VCX3BQ9H321 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC19.59■□□□□ 0.73
VCX3BQ9H321 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
VCX3BQ9H321 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
VCX3BQ9H321 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
VCX3BQ9H321 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
VCX3BQ9H321 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
VCX3BQ9H321 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
VCX3BQ9H321 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
VCX3BQ9H321 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
VCX3BQ9H321 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC19.58■□□□□ 0.73
VCX3BQ9H321 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
VCX3BQ9H321 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
VCX3BQ9H321 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
VCX3BQ9H321 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC19.58■□□□□ 0.72
VCX3BQ9H321 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
VCX3BQ9H321 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
VCX3BQ9H321 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
VCX3BQ9H321 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
VCX3BQ9H321 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
VCX3BQ9H321 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
VCX3BQ9H321 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC19.58■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 14.3 ms